Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00847 ATGTCAACCAAACGCTTCCTTATGCTGGGAATATCCGCCTGCTCTGGTGAAGAATCTTCGGGCCGTATGACCAACCTTGCCAGTAGCATGAGATCATGGGCAACTCGTTATATATGCTGGAGCCTTGCCCGTAGATTTGTTAAGGAGGACACCAAGGTACAGGTTCCAGCTGCAATGGCCTTGGGAACTCTTGCTTTTCAGAATGATGACAATAAAAATCAGATTGTTGAATGCAAGGCATTATTACCCACTCTTGTACTAATGCTTCGATCAGAGGATATTACAATACATTGCGTGGCGGTTGATGTGATTAGAAAACTGGTCAACTCTTCTCCAAATATTAAGAAAGAAGTTCTTCTAGCCAGGGATTTACAACCTGTCATTTGTTTACTTAGTTCCCGCTGTTCGGAGATCCAAACAATGGCAGCCTTTTTACTATGCCAATTTGCAACAGATTCAGATTGTAAGGTTCATGTTTCACAAAGAGGAGCTATTCCACTATTGGTTGACTTGCTTAAGTCTCCAAATGCACTACTTCAGGAAGGGTCAACTTTTGCACTTTGGAGTCTCTACCCTTCCATTAACTACAACGACCTCGCTGAAAACATATTCCCTGAGGATGCCACTGTCGTCGGATCCCCCTCTGCGCCACCAGAGGCCACCGAGAAAGCCGTCCTCCGAATCCTCGCCGCGATCCTCAACCTCATCGGCAAGGACTATAGTGTCGAGCTCGCATGTGACGATTTCTCCGTGATCTGCCTCTGA 765 0.4601 MSTKRFLMLGISACSGEESSGRMTNLASSMRSWATRYICWSLARRFVKEDTKVQVPAAMALGTLAFQNDDNKNQIVECKALLPTLVLMLRSEDITIHCVAVDVIRKLVNSSPNIKKEVLLARDLQPVICLLSSRCSEIQTMAAFLLCQFATDSDCKVHVSQRGAIPLLVDLLKSPNALLQEGSTFALWSLYPSINYNDLAENIFPEDATVVGSPSAPPEATEKAVLRILAAILNLIGKDYSVELACDDFSVICL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00847 254 Pfam Armadillo/beta-catenin-like repeat 152 190 IPR000225 GO:0005515
Gma07g00847 254 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 49 190 IPR044282 -
Gma07g00847 254 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 PROTEIN 49 190 - -
Gma07g00847 254 Gene3D - 30 239 IPR011989 -
Gma07g00847 254 SUPERFAMILY ARM repeat 48 196 IPR016024 -
Gma07g00847 254 SMART arm_5 111 151 IPR000225 GO:0005515
Gma07g00847 254 SMART arm_5 68 109 IPR000225 GO:0005515
Gma07g00847 254 SMART arm_5 152 192 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00847 Gma-Chr7 9003153 9006338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00847 89 190 U-box Gene Family AT5G62560 34.314 1.65e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00847 - - gmx:106799437 243.817