Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00844 ATGAGTTTCCTCCGCAGGTTGTGCCCCTGTTTGCACAAGGGCGGCGCAGCCTTCCACGACGGCGATGACGACGACATAGATCGCAACCACCCCGGCGACTCCTTCGACCTAATCTTCGGCCTCCACACTCTCCAACTCGCCACCAACTTCTTCTCCGACATCAACCGGCTAGGTCATGGAGGCTTTGGTCCTGTTTTCAGGGGATTGATGCCAAATGGTCAAGAAGTGGCGGTTAAGAAGCTGTCATTGGAATCTAGGCAAGGAGATAGAGAATTCACCAATGAAGTCAGGCTATTACTCAGAATTCAGCACAAGAACTTGGTTACATTACTGGGTTGTTGTGCAGAAGGGCCTGAAAAGATGCTTGTATATGAGTATCTGCCAAACAAAAGCCTTGATCGCTTTCTGTTTGATAAGAGAAGGTCTTCATCTttggactgggcaacgcgatttagaatagttacaggtgtggcaagaggacttctctacctgcatgaagaggccccggaaagaattattcacagggacattaaagctagtaacatattgctggatgagaaattaaatccaaaaatttcggactttggtttggcaaggttgttTCCTGGGGAGGACACTCATGTGCAGACATTTAGGATTTCTGGTACACAtggttacatggcccctgaatatgcattgcatggatatctgtctgtgaagacagatgttttcagttatggagtcctgctgttggaaatagttagtgggagaaaaaaccatgatatgcagcttggttcagaaaaggcagatctcctgagctatGCGTGGTCGCTTTATCAAGGAAGGAAGATAATGGACTTAATTGACCCAACCCTTGGTAGATATAATGGTGATGAGGCAGCAATGTGCATTCAGCTAGGTTTGTTGTGCTGTCAAGCAAGCATAATTGAAAGACCTGACATGAATAATGTTAATCTCATGCTCTCGAGTGATTCCTTCACTTTGCCAAGACCAGGAAAACCAGGAATTCAAGGTCGTGCAGGACGTTGGAATACAACCTCAACTTCTGCTTTGACCAATACCAATGCTAGTAGTGCTACCAGGGTCTCAGGTGGTAGTGGTAGTTTTGTAGAGGATTATTCTAGAAATTCTATATCCACCTCTTCTTTTGATGAAGGAAGATGA 1164 0.3342 MSFLRRLCPCLHKGGAAFHDGDDDDIDRNHPGDSFDLIFGLHTLQLATNFFSDINRLGHGGFGPVFRGLMPNGQEVAVKKLSLESRQGDREFTNEVRLLLRIQHKNLVTLLGCCAEGPEKMLVYEYLPNKSLDRFLFDKRRSSSLDWATRFRIVTGVARGLLYLHEEAPERIIHRDIKASNILLDEKLNPKISDFGLARLFPGEDTHVQTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLLLEIVSGRKNHDMQLGSEKADLLSYAWSLYQGRKIMDLIDPTLGRYNGDEAAMCIQLGLLCCQASIIERPDMNNVNLMLSSDSFTLPRPGKPGIQGRAGRWNTTSTSALTNTNASSATRVSGGSGSFVEDYSRNSISTSSFDEGR 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00844 387 Gene3D Phosphorylase Kinase; domain 1 28 126 - -
Gma07g00844 387 Gene3D Transferase(Phosphotransferase) domain 1 127 327 - -
Gma07g00844 387 CDD STKc_IRAK 57 321 - -
Gma07g00844 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Gma07g00844 387 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 385 - -
Gma07g00844 387 MobiDBLite consensus disorder prediction 331 368 - -
Gma07g00844 387 Pfam Protein tyrosine and serine/threonine kinase 55 253 IPR001245 GO:0004672|GO:0006468
Gma07g00844 387 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 385 - -
Gma07g00844 387 SUPERFAMILY Protein kinase-like (PK-like) 35 321 IPR011009 -
Gma07g00844 387 SMART serkin_6 51 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00844 387 MobiDBLite consensus disorder prediction 340 368 - -
Gma07g00844 387 ProSiteProfiles Protein kinase domain profile. 51 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00844 Gma-Chr7 8985452 8987763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00844 37 336 Receptor kinase-like Gene Family AT4G21410 53.947 6.10e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma07g00844 PK_Tyr_Ser-Thr 3.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00844 - - gmx:100790304 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00844 07 8985452 8987763 Gma07g00844 07 8985452 8987763 ECH