Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00841 ATGGCTGAATTCACAGAAAATATGCAATTGCAAAGCAATATTAGACCCTCCCAGTTTCCATTCTTAGAGATTGATCCAAGCATGGAACTCCTAAACCAGTTCTTAGGGATGAACCAACATGTCCTAGAAAACTCAAACTTGATTCCTATGCACAACTTGGTGCCTTTCTCCTGTGACACCTTTTTGGGCCCTCAAGAGCCTGAGTGTCCAGGAAACTTGGAAGAAAATTTCCCTGCCCATGTCAACCACAATGCACTTCCTATTTCCCTCCCCATTTTCCAAGCAGAAAATGAGATCCATGAAGGTAAAAAGAGGAAATCAATGGATCTTCCTGAGACAAGTTCAGCTAACTCAACTCCTGCAGTTTCTGAAAGTGGAAGCAAGATCAAACATAGTTCTGGAAGAGGGAAGAGAGTAAAAAGCAATGTAACAGAAGAGGAGAAAGCAAAGGAAGTGGTTCATGTCAGAGCCAGAAGAGGTCAAGCTACTGATAGTCACAGTTTAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAGAAATTAAGGTGCTTACAGAACATTGTTCCAGGATGTTACAAGACCATGGGTATGGCAGTAATGTTGGATGAAATCATAAACTATGTGCAGTCCTTGCAGCATCAAGTAGAGTTCCTTTCTTTGAAGCTTACTGCAGCAAGTACCTTTTATGACTTCAATTCCGAGACAGATGCTTTGGAAACAATGCAGAGAGCAAGGGCATCCGAGGCAAAAGAGCTAGGAAAGTATAAGAAAGAAGGGTATGGAGGAGTTTCTTTCTTCCAACCAGCATGGCCCCTTTGA 819 0.4225 MAEFTENMQLQSNIRPSQFPFLEIDPSMELLNQFLGMNQHVLENSNLIPMHNLVPFSCDTFLGPQEPECPGNLEENFPAHVNHNALPISLPIFQAENEIHEGKKRKSMDLPETSSANSTPAVSESGSKIKHSSGRGKRVKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDALETMQRARASEAKELGKYKKEGYGGVSFFQPAWPL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00841 272 Coils Coil 238 258 - -
Gma07g00841 272 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 161 211 IPR011598 GO:0046983
Gma07g00841 272 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 271 IPR024097 GO:0006355
Gma07g00841 272 MobiDBLite consensus disorder prediction 111 129 - -
Gma07g00841 272 PANTHER TRANSCRIPTION FACTOR BEE 1 2 271 - -
Gma07g00841 272 Pfam Helix-loop-helix DNA-binding domain 165 212 IPR011598 GO:0046983
Gma07g00841 272 SMART finulus 167 217 IPR011598 GO:0046983
Gma07g00841 272 Gene3D - 161 223 IPR036638 GO:0046983
Gma07g00841 272 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 227 IPR036638 GO:0046983
Gma07g00841 272 MobiDBLite consensus disorder prediction 138 167 - -
Gma07g00841 272 CDD bHLH_AtBPE_like 151 236 - -
Gma07g00841 272 MobiDBLite consensus disorder prediction 103 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00841 Gma-Chr7 8963907 8965766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00841 83 272 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 55.204 3.20e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma07g00841 HLH 0.00017 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00841 - - gmx:100803700 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00841 07 8963907 8965766 Gma08g00404 08 3403259 3405137 ECH
Gma07g00841 07 8963907 8965766 Gma07g00841 07 8963907 8965766 ECH