Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00829 ATGACCAACGAAATGAAAGAAGCAAGTGCCTTAGGAGCTAGAACAGCACGAGCATGCGAGAGCTGCCTAAAAGTAAGAGCACGGTGGTATTGTGCAGCTGATGATGCATTCCTTTGCCATGGCTGTGACAACATGGTTCACTCAGCAAACCAATTAGCAAGTAGACACGAAAGGGTTAAGCTTCAAACTGCATCCTCTAAGGTCAACTACTCAGTGACCCCTAAGGTAGCATGGCACAGTGGATTCACACGCAAGGCAAGAACGCCACGCCACAACAACAACAGACACTCATCATTGAAACAACAACAACAAAAAAAACCATTACATGAAGAACGAGGAGAGGAAGAAGTGTTTTTCAATAACACTATTAGTCTTCTTCCCCTTGTGCCTGAGCTTGGAAGTGAAGAGCCATTGCTTAATGATGAGACTGAGGAGCAACTACTGTGTCGCGTGCCGGTGTTTGATGCTGAGCTTTGTAGCATATACAATGAAGTGAAGGACGAGGTTGTAGCTGCTGGTGAAGAAGCCTTGGACTTGGAAAACTTTTCTTCCGAGTTTCTTCCATCAGATACGGACCTTGCTGAGTTTACTGCTGATGTGAAAAGCTTTCTTGGAAACGGGGCTGATGAGGATTCACCTGATGATGATGAGCACGTGAAAGAATCAGAACTACTGATTCTTGATTGCAAAGAAGAAGAAGGAGATGAGGAAATGGATGAATGTATTGATGGAGTACTAATTGGAGCCAAAGATGCAATGGTGAAGGTCAAAGATGAAGAAGAACTTGATGCTGATGATGACACAGCTTGCCATTTGGATTCGATTCTTGATATGAACGGCGAGGCATTTAATTGGAATATTGTTGAATCAGAATCACCTGCACAGGCACAAGAAGATGAAGTGAGTAAAGTGGGAACTAAGAAGGACATATTTTTGAGATTAAACTATGAAGAAGTCATTACTGCTTGGGCAAGTCAAGGTTCTCCATGGACTAATGGGACCCCACCTAAGTTCTTCAACTCTGATGATTGCTGGCTAGACTTCTTGTATCATAGCCGGTCTCTTATCTAG 1071 0.4342 MTNEMKEASALGARTARACESCLKVRARWYCAADDAFLCHGCDNMVHSANQLASRHERVKLQTASSKVNYSVTPKVAWHSGFTRKARTPRHNNNRHSSLKQQQQKKPLHEERGEEEVFFNNTISLLPLVPELGSEEPLLNDETEEQLLCRVPVFDAELCSIYNEVKDEVVAAGEEALDLENFSSEFLPSDTDLAEFTADVKSFLGNGADEDSPDDDEHVKESELLILDCKEEEGDEEMDECIDGVLIGAKDAMVKVKDEEELDADDDTACHLDSILDMNGEAFNWNIVESESPAQAQEDEVSKVGTKKDIFLRLNYEEVITAWASQGSPWTNGTPPKFFNSDDCWLDFLYHSRSLI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00829 356 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 6 1 350 - -
Gma07g00829 356 ProSiteProfiles Zinc finger B-box type profile. 14 61 IPR000315 GO:0008270
Gma07g00829 356 CDD Bbox1_BBX-like 18 59 - -
Gma07g00829 356 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 350 - -
Gma07g00829 356 SMART bboxneu5 14 61 IPR000315 GO:0008270
Gma07g00829 356 MobiDBLite consensus disorder prediction 81 112 - -
Gma07g00829 356 Pfam B-box zinc finger 16 61 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00829 Gma-Chr7 8833626 8844077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00829 8 336 C2C2-CO-like Transcription Factor Family AT1G25440 35.977 6.43e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma07g00829 zf-B_box 2.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00829 - - gmx:100802113 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00829 07 8833626 8844077 Gma09g01709 09 42725927 42728367 GST
Gma05g02270 05 43743008 43744891 Gma07g00829 07 8833626 8844077 PCT
Gma08g00395 08 3329419 3331437 Gma07g00829 07 8833626 8844077 PCT
Gma07g00829 07 8833626 8844077 Gma05g02270 05 43743008 43744891 PCT
Gma07g00829 07 8833626 8844077 Gma08g00395 08 3329419 3331437 PCT