Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00827 ATGTCATTTCCTAGGCAAACTCAGAAACAAGGAATGGAATGTAAGAGAGGAAAAGAGAAAGCTCCAGCCAAAGAAGAAAACATAAACACATTGAGGAAAATTAAAATTGTGTACACTGACCCTGATGCCACAGATTCTTCAAGTGAAGAAGATGATAAGTTTTTGAGCAATGGTTATCGGTTAAATGGATGCTCTAAGCGGGTTGTCAAGGAAATTTCGCTTCCATGCATGCCAAGCAAATTACATGAAGAGAATTCTTCACAAGAAGATGTCAATAGTGAAAAGATCAAAGCAAGTAGGAGGAACAGGAAACCATCAAGCATGTACAAAGGAGTTCAACGTAGGAAATGGGGGAAATATGTAGCAGAAATTAAAGACCCTATTCGGGGGGTCAGAATGTGGCTTGGTACTTTTGATACTGAAGAAGAGGCTGTTGTGGCATATGAGAGAAAGAGGAATGAGTTTGACAGCTCTTTGTTGGCTTTGAGCAAAAGGGATGCATTGGCTTGTGAAAGTTCCAAAGAAAAAGAAGTATTGTTTCATCCATCTCCGTCATCAGTGCTTGATGTCAGCACTACAAAAGCTCCACTAGATGTTAATGACCTTAATGGCTCAGTCAAAGAAAAGGAAAATGTGGAAACAAATGGTGAAGGAGGAGGCATTGATGTGGAACCAGTTTATAGTGAGGACAATTCAATTTTGCATTTGCTAGAGGAGCCAGTTGTGGCATCATTGGCTGGTCGTGATGATTTCTATTTGGATGAAATAGAGAAAGAGATAATGCTGTTTGGTAATGACTTTTATAATTTCTTGGACAATGACATGAAAGGTGGTTCTGTGTGGAATGTGGAACATGGGGAGGGCACCACCCTTCCCCCTGTAGACAGTGCTTTTGAAGAGTTAGCTTGGATTGATGAAACTCTAAATTGGGAATGTTCCTAA 942 0.4013 MSFPRQTQKQGMECKRGKEKAPAKEENINTLRKIKIVYTDPDATDSSSEEDDKFLSNGYRLNGCSKRVVKEISLPCMPSKLHEENSSQEDVNSEKIKASRRNRKPSSMYKGVQRRKWGKYVAEIKDPIRGVRMWLGTFDTEEEAVVAYERKRNEFDSSLLALSKRDALACESSKEKEVLFHPSPSSVLDVSTTKAPLDVNDLNGSVKEKENVETNGEGGGIDVEPVYSEDNSILHLLEEPVVASLAGRDDFYLDEIEKEIMLFGNDFYNFLDNDMKGGSVWNVEHGEGTTLPPVDSAFEELAWIDETLNWECS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00827 313 MobiDBLite consensus disorder prediction 1 24 - -
Gma07g00827 313 MobiDBLite consensus disorder prediction 83 101 - -
Gma07g00827 313 MobiDBLite consensus disorder prediction 80 111 - -
Gma07g00827 313 ProSiteProfiles AP2/ERF domain profile. 108 165 IPR001471 GO:0003700|GO:0006355
Gma07g00827 313 SMART rav1_2 108 162 IPR001471 GO:0003700|GO:0006355
Gma07g00827 313 Pfam AP2 domain 109 155 IPR001471 GO:0003700|GO:0006355
Gma07g00827 313 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 2 313 - -
Gma07g00827 313 PRINTS Ethylene responsive element binding protein signature 109 120 IPR001471 GO:0003700|GO:0006355
Gma07g00827 313 PRINTS Ethylene responsive element binding protein signature 131 147 IPR001471 GO:0003700|GO:0006355
Gma07g00827 313 PANTHER - 2 313 - -
Gma07g00827 313 SUPERFAMILY DNA-binding domain 107 155 IPR016177 GO:0003677
Gma07g00827 313 CDD AP2 107 150 IPR001471 GO:0003700|GO:0006355
Gma07g00827 313 Gene3D AP2/ERF domain 108 158 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00827 Gma-Chr7 8821435 8822376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00827 31 174 AP2-EREBP Transcription Factor Family AT1G68550 41.333 3.60e-24 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma07g00827 AP2 3e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00827 - - gmx:102661579 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00827 07 8821435 8822376 Gma07g00827 07 8821435 8822376 ECH
Gma07g00827 07 8821435 8822376 Gma09g01711 09 42739026 42739900 GST