Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00805 ATGGATTTAGAAGACAAGTTCCTCGCTAAAGTTTCTGGTGTTCAAAGCCTTTCATCCAGTGCACAAAGTACTCCAGAAAAAAATGGCCATTCAGATGATGCTTCAAGAAGTTCAGAACTTCTTCAGGAGTTCCTAAAATCTGGTCCTAAGAAGGAAATTTTACGAACTTGCTTTGATAAGGACAAAAAGAACATTTCTTCAAAAAGCAGGATGGCTGAAACCAAGTCAACCAGTAAGATTGCCAAGAAACAGGACTCAAAAAAAGTTTCTGGTATCAGCAATCAGCCTTCTAGGAAGCAACATCGCAAAGGAGAAAACCCGGTGCGGTTCGTACCAACTCCTGACCCACCTAGTGATTTTGGACATTCAAACTCTTGGATCTGTAAGAATTCTGCCTGCCGAGCTGTTCTCTCTAAAGATGACACATTTTGTAGAAGGTGCTCTTGCTGTATTTGCCACCTTTTTGATGATAACAAGGATCCTAGTCTTTGGTTGGTATGCACATGTGAATCTTCTCAAGGGGACTCTTGTGGGTTGTCTTGCCATATTGAGTGTGCTCTTCAACATGAAAAAGTAGGAGTTGTTGATCATGGACAACTGATGCAACTAGATGGTGGTTATTGTTGTGCATCCTGCGGTAAAGTTACTGGGATACTTGGATGTTGGAAGAAGCAGCTAAATATAGCAAAAGATGCCCGGCGTGTAGATGTACTATGCTACAGAATATATTTGAGCTACAGGCTTTTGGATGGTACTTCAAGATTTAAAGAATTGCATGAAATGGTAAAAGAGGCAAAGGCTAAACTGGAAACTGAAGTTGGTCCAGTTAATGGGGTTTCTGCCAAGATGGCCCGTGGGATTGTCAGCAGACTCCCTATTGCCAGTGACGTACAAAAACTCTGCTCTCTTGCTATTGAGAAAGCTGATGAATGGTTGGCCACTGTTCCCAATGTACATCCAGAATCCAGAGAGGGTTCTCTTCCTGCTGCATGCAAGGTTGTGTTTGAAGAGGTAACAGCTTCCTCAGTCAAAATCATTTTAATTGAAATGTCAAATGCATCTTCTGGGGACATTAAGGGATACAAGCTCTGGTATTACAAGAGTAGGGAGGAGTCGCACACTAAAGATCCCGTTTCTGTGTTTCCCAAAGCTCAGAGAAGGATTTTGATATCCAACCTCCAGCCTTGCACAGAATATACATTTCGGGTTGTATCTTTTACAGATATGGGTGACCTGGGTCATTCTGAGGCCAAGTGTTTCACCAAGAGCATTGAGATATTGGAAAAGAATTCATCGTCATCAGTTGCCATGAATAAAAAAAAGGAGAACCTTCAAACTGAATGCAATTCTTCTGGCTCCAAAATGGAGCCCAATCCCACAATGGAAGACTCTGGATTTAAGGTTCGAGACCTTGGGAAAATTTTGCATCTTTCTTGGGCTCAAGAACAAGGCTGCTCTGAGGAATTTTGCTGCGCTGACAAGAGAAAATGCTGTGGGCAAAGTGAAACAATCAAGCCTACCAATCCACAAGAGCTGTTGCCTTCAGTTTCTCGCGACCTTGATCTAAATGTTGTTTCGGTGCCTGATTTAAATGAAGAGCTTACACCTCCATTCGAGTCTTCTAGGGATGAAGATAATGGTTGCACTTTGCAGCAGGCTGTTGAGGCAGATGATGATGCTGCTTCGCATGATTTAGAAAAAAATTTAGCAAGATCACACGGTAGTGGTGGTTCCCAAACTTGGAACCATGGACCTACTGGTGAAGTTCCAGCAGTTGACTCTCGTGGAGATGCATGTAGGAAGAGGGTAGCAAGCACAAATGAAGAGACACATGATTGTGACAGCACTTTGATAAATGATTCTCCTTTACGTGCATCTGATGGTCCATTCTCCTTAGATGAGAACTTTGAGTATTGCGTGAAAGTAATTCGCTGGCTAGAATGCCAGGGTCATATCAAGCAGGAATTTAGGTTGAAATTGCTGACATGGTTTAGTTTGAGGTCGACAGAACAAGAACGTCGGGTGGTAAATACTTTCATTCAAGCTCTGATTGATGATCCAAGTAGTTTGGCAGGGCAACTAGTTGACTCATTTTCTGATATTATATCCAACAAGAGGCCAAGAAATGGGTTCTCCAATAAGGCTGTGTCATCAAGTTAA 2160 0.4236 MDLEDKFLAKVSGVQSLSSSAQSTPEKNGHSDDASRSSELLQEFLKSGPKKEILRTCFDKDKKNISSKSRMAETKSTSKIAKKQDSKKVSGISNQPSRKQHRKGENPVRFVPTPDPPSDFGHSNSWICKNSACRAVLSKDDTFCRRCSCCICHLFDDNKDPSLWLVCTCESSQGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLNIAKDARRVDVLCYRIYLSYRLLDGTSRFKELHEMVKEAKAKLETEVGPVNGVSAKMARGIVSRLPIASDVQKLCSLAIEKADEWLATVPNVHPESREGSLPAACKVVFEEVTASSVKIILIEMSNASSGDIKGYKLWYYKSREESHTKDPVSVFPKAQRRILISNLQPCTEYTFRVVSFTDMGDLGHSEAKCFTKSIEILEKNSSSSVAMNKKKENLQTECNSSGSKMEPNPTMEDSGFKVRDLGKILHLSWAQEQGCSEEFCCADKRKCCGQSETIKPTNPQELLPSVSRDLDLNVVSVPDLNEELTPPFESSRDEDNGCTLQQAVEADDDAASHDLEKNLARSHGSGGSQTWNHGPTGEVPAVDSRGDACRKRVASTNEETHDCDSTLINDSPLRASDGPFSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQALIDDPSSLAGQLVDSFSDIISNKRPRNGFSNKAVSSS 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00805 719 PANTHER VIN3-LIKE PROTEIN 1 55 715 - -
Gma07g00805 719 MobiDBLite consensus disorder prediction 12 28 - -
Gma07g00805 719 MobiDBLite consensus disorder prediction 436 458 - -
Gma07g00805 719 Gene3D Immunoglobulins 314 424 IPR013783 -
Gma07g00805 719 MobiDBLite consensus disorder prediction 436 459 - -
Gma07g00805 719 MobiDBLite consensus disorder prediction 65 109 - -
Gma07g00805 719 MobiDBLite consensus disorder prediction 11 39 - -
Gma07g00805 719 Pfam Fibronectin type III domain 332 413 IPR003961 GO:0005515
Gma07g00805 719 ProSiteProfiles Fibronectin type-III domain profile. 329 426 IPR003961 GO:0005515
Gma07g00805 719 CDD FN3 332 411 IPR003961 GO:0005515
Gma07g00805 719 SUPERFAMILY Fibronectin type III 331 411 IPR036116 GO:0005515
Gma07g00805 719 Pfam PHD - plant homeodomain finger protein 128 246 IPR032881 -
Gma07g00805 719 MobiDBLite consensus disorder prediction 569 597 - -
Gma07g00805 719 MobiDBLite consensus disorder prediction 65 86 - -
Gma07g00805 719 PANTHER VIN3-LIKE PROTEIN 2-RELATED 55 715 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00805 Gma-Chr7 8592447 8600920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00805 124 710 PHD Gene Family AT3G24440 49.584 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00805 - - gmx:100780157 1455.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00805 07 8592447 8600920 Gma09g01741 09 42993383 42995881 GST
Gma05g02260 05 43638153 43649106 Gma07g00805 07 8592447 8600920 PCT
Gma08g00382 08 3216149 3219818 Gma07g00805 07 8592447 8600920 PCT
Gma07g00805 07 8592447 8600920 Gma05g02260 05 43638153 43649106 PCT
Gma07g00805 07 8592447 8600920 Gma08g00382 08 3216149 3219818 PCT