Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00720 ATGGACAATTATGGTTCTTCACAACATCCATATGGGTATCCCAACCCTTATTCATACCCTCCTCATGATCCATATGCTCAACCAccatatccatatccatatccatatccatatccatatccacatccaACAAACCCTCCTCATAATAACAACTCAAACTACCCATACCCCCCACCTCCTCCACCACCACACTCCTCATCCCCTTATTCTAGCCCCATAAACTATTCCTCATACcctcctcctcctcctcctcctcctcctcctccATCTACCTCATCACATGGCTCCTTTGACTATCCTATGCCTCAGCCACCTCACACTTATCCTTACCCTCACCGAGTCCCTCCAGAATGGAGTGTCACAACAGGAGGTGGAGTGTCTCACTCTCACGCTAGTGATAGTTATAACCCTCCTCACTCTGCTGCTTACCCTACTTTGGATGATCTCATGAGCAATGATAGGTTGTCAGATAATAATAACCTCCCAAGTGCACCTCCCTTGACACATTCCCCACCAATTCTATATCTTGATAGGAGGGATGAGTTTTATGGTTATTCTAGCTACTCCTCCTCAAGTTTGGATCAGGGGGATCCTTCTAGGCTCTCAGATAATAATGATGACTCAGTGAATAGTGAGAGTTTGCAGATTGTGCCGGCTCAGCACAAAGGATCTCTGAGGGTTTTGCTCCTCCATGGGAATTTAGATATTTGGGTTCATGGAGCCAAAAACCTTCCAAACATGGACATGTTCCACAAGACGTTGGAGGACATGATTGGTAGATTCCCCGGTACTGTTGCGAGCAACAAGATTGAAGGAACGGTAAGCCGGAAGATTACTAGTGATCCTTATGTGACAATTTCTGTGTCAAATGCTGTAATTGGTAGGACTTTTGTGATTAGCAATAGTGAGAATCCTGTGTGGGAGCAACATTTCTATGTTCCTGTTGCACACCATGCTGCTGAAGTTCATTTTGTTGTGAAGGACAGTGATGTGGTGGGTTCACAGCTCATTGGCGTTGTGGCAATTCCTGTGGAAAAAATATACTCAGGGCAAAAGGTACAAGGGACCTACCCTATCCTGAACAGCAATGGTAAGCCTTGTAAGCCAGGTGCTGTTTTGATGGTATCCATTCAGTACATTCCAATGCATACACTTATCATGTATTACCAAGGAGTTGGAGCTGGTCCTGACTACATTGGGGTTCCTGGCACATATTTTCCATTGAGGAAAGGTGGAACAGTTACTCTATACCAAGATGCTCATGTTCCAGATGGTTGCCTCCCTAATGTTGTGCTTGATAATGGTGTGTATTATGCTCATGGAAAGTGTTGGCTTGACATCTTTGACGCCATAAATCGAGCTAAGCGTTTGATTTACATTACGGGGTGGTCGGTGTGGCACAAAGTTAGGCTGGTAAGGGATCCTGGAAATCCATCAAAGTTCACCCTGGGTGATATTCTGAGGTCTAAGTCATCGGAGGGAGTAAGAGTGCTTCTCCTTATTTGGGATGACCCTACATCAAGAAGCATTCTAGGTTACAAAGTGGATGGTGTGATGGCAACTCATGATGAGGAAACTAGACGATTTTTCAAGCACTCTTCTGTGCACGTGCTGCTTTGTCCTCGCATTGCTGCAAAACGTCATAGCTGGGCCAAACAAAAGGAAGTTGGAACAATATATACACATCATCAGAAAACTGTAATTGTGGATGCTGATGCCGGAAATAACCAAAGAAAAATAGTAGCATTTGTTGGCGGACTTGATTTGTGTGATGGGCGATATGATACTCCCCACCATCCTCTGTTTAGGACGCTGCAGACACTGCATAAGGATGACTATCACAACCCTACTTTCACGGGTAATACTGGTGGTTGTCCACGGGAGCCATGGCATGACTTGCATTCTAAAATTGATGGTCCAGCAGCTTACGATATTTTGAAAAACTTTGAGGAGCGCTGGTTAAGAGCCGCAAAACCAAAAGGGATTCAAAAGTTGAGGAGTTCATACGATGATGCGTTGCTTAAGCTAGACAGAATCGGAGATATTATTAGTTCATCTAATGCTCCTAGTGTCGGTGATGATAATCCTGAGTCATGGCATGTTCAGatattccgttcaattgattcaagttctgtcaaggggtttccaaaggagccaaaagatgcatcaagcatgaatctagtatgtgggaagaatgtgctgattgacatgagcatacatacagcatatgtaaaggccattcgtgctgcacaacattacatttatatagagaatcaatatttcattgggtcttcatataattggagtcaacataaagaccttggtgctaataatttaattcctatggaaattgcgctgaagattgctgcaaagataagggcaaatgagagatttgcagtgtacattgttattccaatgtggccagagggtgttccaactggtgctgccacccaaagaattctattttggcagcataaaacaatgcaaatgatgtatgagacaatttacaaggctttggttgaagttgggcttgaaacagcattctctccacaagactatttgaactttttttgtcttggcaatagggaggccatagatatgtacgagaatatcactgtgtctggaactcctccgccagcaaatagtccacaagcatttagtagaaacaatcgccgtttcatgatttatgttcattcaaaaggcatgatagttgatgatgaatatgtcatattggggtctgcaaacatcaaccagcgctctatggaaggaacaagggacaccgagattgcaatgggtgcgtaccaacctcatcatacctgggcaagaagccagtatcatcctcgtgggcaaatccatggatataggatgtcactttgggctgaacatacgggtacgattgaagactgcttcttacaaccagagagccttgaatgtgttagtaggattagaacaatgggtgagctgaactggaagcaatttgcatcaaatgatgtaacagaaatgacagggcatctgctcaagtacccggtagaagtcgatcgaaagggtaaggtaagatccctccCGGGCCACGAAGAGTTTCCGGATGTGGGAGGAAAGATTGTAGGATCATTCATTGCCATTCAGGAGAATCTAACCATTTGA 3144 0.2987 MDNYGSSQHPYGYPNPYSYPPHDPYAQPPYPYPYPYPYPYPHPTNPPHNNNSNYPYPPPPPPPHSSSPYSSPINYSSYPPPPPPPPPPPSTSSHGSFDYPMPQPPHTYPYPHRVPPEWSVTTGGGVSHSHASDSYNPPHSAAYPTLDDLMSNDRLSDNNNLPSAPPLTHSPPILYLDRRDEFYGYSSYSSSSLDQGDPSRLSDNNDDSVNSESLQIVPAQHKGSLRVLLLHGNLDIWVHGAKNLPNMDMFHKTLEDMIGRFPGTVASNKIEGTVSRKITSDPYVTISVSNAVIGRTFVISNSENPVWEQHFYVPVAHHAAEVHFVVKDSDVVGSQLIGVVAIPVEKIYSGQKVQGTYPILNSNGKPCKPGAVLMVSIQYIPMHTLIMYYQGVGAGPDYIGVPGTYFPLRKGGTVTLYQDAHVPDGCLPNVVLDNGVYYAHGKCWLDIFDAINRAKRLIYITGWSVWHKVRLVRDPGNPSKFTLGDILRSKSSEGVRVLLLIWDDPTSRSILGYKVDGVMATHDEETRRFFKHSSVHVLLCPRIAAKRHSWAKQKEVGTIYTHHQKTVIVDADAGNNQRKIVAFVGGLDLCDGRYDTPHHPLFRTLQTLHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDILKNFEERWLRAAKPKGIQKLRSSYDDALLKLDRIGDIISSSNAPSVGDDNPESWHVQIFRSIDSSSVKGFPKEPKDASSMNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAAKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLETAFSPQDYLNFFCLGNREAIDMYENITVSGTPPPANSPQAFSRNNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHHTWARSQYHPRGQIHGYRMSLWAEHTGTIEDCFLQPESLECVSRIRTMGELNWKQFASNDVTEMTGHLLKYPVEVDRKGKVRSLPGHEEFPDVGGKIVGSFIAIQENLTI 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00720 1047 Gene3D C2 domain 227 367 IPR035892 -
Gma07g00720 1047 PANTHER PHOSPHOLIPASE D 134 1047 IPR015679 -
Gma07g00720 1047 MobiDBLite consensus disorder prediction 186 210 - -
Gma07g00720 1047 MobiDBLite consensus disorder prediction 122 139 - -
Gma07g00720 1047 PANTHER PHOSPHOLIPASE D ALPHA 1 134 1047 - -
Gma07g00720 1047 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 558 593 IPR001736 GO:0003824
Gma07g00720 1047 Pfam C2 domain 232 359 IPR000008 -
Gma07g00720 1047 CDD C2_plant_PLD 227 380 - -
Gma07g00720 1047 ProSiteProfiles C2 domain profile. 217 357 IPR000008 -
Gma07g00720 1047 MobiDBLite consensus disorder prediction 1 24 - -
Gma07g00720 1047 SUPERFAMILY Phospholipase D/nuclease 428 657 - -
Gma07g00720 1047 SMART pld_4 558 593 IPR001736 GO:0003824
Gma07g00720 1047 SMART pld_4 893 920 IPR001736 GO:0003824
Gma07g00720 1047 Pfam Phospholipase D Active site motif 894 920 IPR001736 GO:0003824
Gma07g00720 1047 Pfam Phospholipase D Active site motif 559 593 IPR001736 GO:0003824
Gma07g00720 1047 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 230 381 IPR035892 -
Gma07g00720 1047 Pfam Phospholipase D C terminal 967 1037 IPR024632 -
Gma07g00720 1047 Gene3D Endonuclease Chain A 436 674 - -
Gma07g00720 1047 MobiDBLite consensus disorder prediction 41 93 - -
Gma07g00720 1047 MobiDBLite consensus disorder prediction 41 172 - -
Gma07g00720 1047 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 893 920 IPR001736 GO:0003824
Gma07g00720 1047 Gene3D Endonuclease Chain A 704 947 - -
Gma07g00720 1047 SUPERFAMILY Phospholipase D/nuclease 722 979 - -
Gma07g00720 1047 SMART C2_3c 233 356 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00720 Gma-Chr7 7593006 7600543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00720 64 1047 Phospholipase D Gene Family (Wang group) AT2G42010 68.027 0.0 1434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00720 K01115 - gmx:100805294 1954.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00720 07 7593006 7600543 Gma07g00720 07 7593006 7600543 ECH