Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00665 ATGGGAAGGAAGCCATGTTGTGACAAGATGGGGTTGAAGAAGGGTTCTTGGACTGCTGAAGAGGATGAGATTCTTGTTAATTATATCAACAAGAATGGTGGTCATGGAAGTTGGCGTTCTCTCCCTAAGTTAGCAGGTCTTCTTcgttgtggcaagagttgccggctaagatggacaaactacctcagaccagatattaaacgtggttcctttacacttgaggaagaaaaactaatcatacagcttcatggtatccttggaaatagGTGGGCTGCTATAGCCTCTCAGCTACCAGGAAGAACAGACAATGAGATCAAGAACTTATGGAACACCCACTTAAAGAAACGTCTCATTTGCATGGGCCTGGACCCACAAACCCACCAACCACTAGCCTCTCCTCATAACCTAAACGACAAGGCCCATGCATCATCCACTTCAACCCGCCACATGGCCCAGTGGGAGACTGCAAGGCTTGAAGCAGAGGCCAGGCTCTCAAGGGAGCCACATTTCAACAACAAAACTGACTCTGACTACTTCCTCCGCATTTGGAACTCTGAAGTTGGAGAATCTTTTCGTGATGTCCACAAATCAGAATCTTCAATCAAATGTGAGTCATTGTCTGCCACCACTACTACTACCACTACAGATTTGGCTTCCTCAACCCCAGCAAGCATTGTCAAAAAGGAGTTTTTGTGGGGTGTTAAGAAAATTGTCTCTTATTCATCATCAAGCTCTAGTGAACTAGAACATGACTCTTGTGACACTTCATTGCAGTTCTTGTTGGACTTTCCTATAAACAATGACATGAGCTTCTTAGAATTATGA 825 0.3806 MGRKPCCDKMGLKKGSWTAEEDEILVNYINKNGGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGSFTLEEEKLIIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLICMGLDPQTHQPLASPHNLNDKAHASSTSTRHMAQWETARLEAEARLSREPHFNNKTDSDYFLRIWNSEVGESFRDVHKSESSIKCESLSATTTTTTTDLASSTPASIVKKEFLWGVKKIVSYSSSSSSELEHDSCDTSLQFLLDFPINNDMSFLEL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00665 274 Gene3D - 11 68 - -
Gma07g00665 274 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Gma07g00665 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Gma07g00665 274 SMART sant 13 64 IPR001005 -
Gma07g00665 274 SMART sant 67 115 IPR001005 -
Gma07g00665 274 CDD SANT 16 62 IPR001005 -
Gma07g00665 274 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Gma07g00665 274 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 273 - -
Gma07g00665 274 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Gma07g00665 274 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Gma07g00665 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Gma07g00665 274 PANTHER BNACNNG13680D PROTEIN 1 273 - -
Gma07g00665 274 SUPERFAMILY Homeodomain-like 10 109 IPR009057 -
Gma07g00665 274 CDD SANT 70 113 IPR001005 -
Gma07g00665 274 Gene3D - 70 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00665 Gma-Chr7 6916330 6918525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00665 1 273 MYB Transcription Factor Family AT3G61250 64.236 2.83e-122 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma07g00665 Myb_DNA-binding 2.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00665 K09422 - gmx:100788528 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02128 18 54963401 54965868 Gma07g00665 07 6916330 6918525 PCT
Gma09g02391 09 49259257 49261694 Gma07g00665 07 6916330 6918525 PCT
Gma07g00665 07 6916330 6918525 Gma18g02128 18 54963401 54965868 PCT
Gma07g00665 07 6916330 6918525 Gma09g02391 09 49259257 49261694 PCT