Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00634 ATGGCAGGGCGGTCGGTGTTGAACGCCGGTGTTCGCGTAGAAGATAGTGGCAGCATTGTTGGATGCTCAAACGACGGTTCTCAGCGCCGTTTCGAGGAGTTGGTTTCTGAGTTCACGAGCGAGATCTGTGGGAGTGATTATTTTTTGCCTTTTCCGCCAATGTTGGGTGATGGGAAACCTGTGGATTTGTATAAGCTGTTTTTGGTGGTGAGAGGGAAGGGTGGATACGACGCCGTTTGCAATTGTAAGTTGTGGGATATCGTTGGGGAGGAGTCTGGGTTGGGTGTGAGTGTTGGTTCTTCTGTGAAGTTGGTGTATAGTAAGTATTTGAGTGCTTTGGATGCGTGGTTGAAGAAGGTTGCGGAGAGTAAGGTGTCCCCTGAGTGTGGTGTGGTGGATGATAGGGACAAGTTCGGGAGGCGGTTGATGGAGTTGCAGGCAGAGGTGGAAGGGTTGTTATCTGGTTGTGGGGAGGGTGATGTGGCTCGTGAGGAGGTCAAGGGTAGAGTTGATGATGATGATGATAATGTGGATGGGAGGAAGTCGTGTGGTGATGGAAATGGAGGGTGTCTTCCTGATTTGGAGGTGCCGGAGGGTGACATGAATGAGTCGGTTATTGGAAGTGGGGGTGAGGGAAATGAGGTTGATGGAGGTGAAGGAGATAGAAATGGAGGGTATCATGATTTGGAGATGCCGGACCGCGAGGTGAATGAGTCGGTGAATGGAAACTCAGGTGAGGGAAACGATGCAATGGAAGTGGGGGAAGAGTTTGATAGAGGGATAATGTCTAAAGAGCAGGTGGTGGATGTATCAGATGGGGTGAACTACAGTGTGGCTGGATTGTTGAGTGGAGGTCAGAAGTGTGGCGGCAATGATGATAAGGGCTTGGTGTTGGATCCATCTGGTGGGGATAGTGATGGTCGAAAGAGGAAGAGAGACATGTTGGATTTGTCTGATGGTGATAGTGATAGTGATAGTTCTGATCGTAAGAGGATGAGAGAGTTTGCGTTGGATATGCTGAGCTGGGTTACAGGTGCCGCAAAGAATCCCTGTGATCCTGAAGTTGGTTCAATACCTGAAAAGGCAAAGTGGAAGTCTTACAGTAATCAGGAGGTGTGGAAACAGGTGCTGTTGTTTCGAGAATCAGCGTTTCTCAAAAGAGGTTCTGATCCAAGCAGTGAACAACGTAGCTGGCAGAGTCAGAAGATGCACCCTTGCTTGTATGAAGATCACCTTGGGACAAACTACAATCTTAGGGATAGGTTGAAACGTGACAAGAAGATTTTAGTTGGCCAATCTACACCATCTGCACGAAGCTCTTCTGATTCATCTGTAGGAGCTGAGAACAGAACACCAAGTCCTCATACTGAAGATCCCTCTGATGCAAATTCAGGTCTTGACAGATGTGCCACCGTACGCATCCCTTTGGGGGCAAATCATCAAGCTGAAATACCAGAATGGACCGGTGTGATTTCTGAAGGTTATTCTAAGTTTTCAGGGACCCCGATATGGCCATTGGCAACAGCAAATACCAGACTACTTATTGAAAGGGACCCTATAGGAAAGGGAAGACAAGATTCATGCGGCTGCCCTGTACCAGGTTCTGTTGAGTGTGTAAGATTCCACATTACTGAGAAAAGGGCTAAAGTTCATCTGGAATTGGGGGCAGTATTTTATGACTGGAATTTTGATCAGGTAGGTGAAGATGTTAAGCTATTGTGGATGGAAGAAGAAGAGAAAAAATTCAAGGATGTGATACGATCAAACCCTCCATCACCTGAGACATATTTCTGGGACCATATCTTTAGGGCATTTCCTACGAAGAGCAGGGCAGATTTAGTTAGCTACTACTTCAATGTCTTTATTTTGGAGCGCAGAGGATACCAAAATAGGCATACTCCCAATAACATTAACAGTGATGACGAGGACGATGAAGCTGGACCACTGAGGAATGTTTTCGGACAGCAGACACAAAATTCGCGTGGTTCCATCTTATTAACCCCCAAAAAGTCACAGACAAAGAAAAAGTAG 2031 0.4682 MAGRSVLNAGVRVEDSGSIVGCSNDGSQRRFEELVSEFTSEICGSDYFLPFPPMLGDGKPVDLYKLFLVVRGKGGYDAVCNCKLWDIVGEESGLGVSVGSSVKLVYSKYLSALDAWLKKVAESKVSPECGVVDDRDKFGRRLMELQAEVEGLLSGCGEGDVAREEVKGRVDDDDDNVDGRKSCGDGNGGCLPDLEVPEGDMNESVIGSGGEGNEVDGGEGDRNGGYHDLEMPDREVNESVNGNSGEGNDAMEVGEEFDRGIMSKEQVVDVSDGVNYSVAGLLSGGQKCGGNDDKGLVLDPSGGDSDGRKRKRDMLDLSDGDSDSDSSDRKRMREFALDMLSWVTGAAKNPCDPEVGSIPEKAKWKSYSNQEVWKQVLLFRESAFLKRGSDPSSEQRSWQSQKMHPCLYEDHLGTNYNLRDRLKRDKKILVGQSTPSARSSSDSSVGAENRTPSPHTEDPSDANSGLDRCATVRIPLGANHQAEIPEWTGVISEGYSKFSGTPIWPLATANTRLLIERDPIGKGRQDSCGCPVPGSVECVRFHITEKRAKVHLELGAVFYDWNFDQVGEDVKLLWMEEEEKKFKDVIRSNPPSPETYFWDHIFRAFPTKSRADLVSYYFNVFILERRGYQNRHTPNNINSDDEDDEAGPLRNVFGQQTQNSRGSILLTPKKSQTKKK 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00634 676 CDD SANT 574 621 IPR001005 -
Gma07g00634 676 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1 50 675 - -
Gma07g00634 676 MobiDBLite consensus disorder prediction 215 230 - -
Gma07g00634 676 Gene3D - 20 127 IPR036431 GO:0003677
Gma07g00634 676 MobiDBLite consensus disorder prediction 631 676 - -
Gma07g00634 676 Pfam ARID/BRIGHT DNA binding domain 50 112 IPR001606 GO:0003677
Gma07g00634 676 MobiDBLite consensus disorder prediction 651 669 - -
Gma07g00634 676 ProSiteProfiles ARID domain profile. 25 118 IPR001606 GO:0003677
Gma07g00634 676 MobiDBLite consensus disorder prediction 289 329 - -
Gma07g00634 676 MobiDBLite consensus disorder prediction 170 230 - -
Gma07g00634 676 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 50 675 - -
Gma07g00634 676 MobiDBLite consensus disorder prediction 303 329 - -
Gma07g00634 676 MobiDBLite consensus disorder prediction 432 460 - -
Gma07g00634 676 SUPERFAMILY ARID-like 46 122 IPR036431 GO:0003677
Gma07g00634 676 MobiDBLite consensus disorder prediction 428 466 - -
Gma07g00634 676 CDD ARID 27 114 - -
Gma07g00634 676 SMART bright_3 26 119 IPR001606 GO:0003677
Gma07g00634 676 SMART ARID_2 22 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00634 Gma-Chr7 6510417 6513749 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Gma07g00634 ARID 4.1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00634 - - gmx:100779445 1280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00634 07 6510417 6513749 Gma16g00316 16 3321245 3324301 GST
Gma18g02165 18 55371622 55377062 Gma07g00634 07 6510417 6513749 PCT
Gma09g02358 09 48954536 48960048 Gma07g00634 07 6510417 6513749 PCT
Gma07g00634 07 6510417 6513749 Gma18g02165 18 55371622 55377062 PCT
Gma07g00634 07 6510417 6513749 Gma09g02358 09 48954536 48960048 PCT