Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00632 ATGGGAGGTTGCTGTTGTTCTGCCAGGAAACCTCACCTGCATGGAACGCCAGTGTATTACTATTGCCCACCAACTTTAGAAGAGCATGAGTCTTTAACGTCTAATGATGGTACAGCTACGTCACTCACTACTGGATTGCTGGTAGGCTTGAACCTGGAAACTTCCACACCTGATACATACCATCCCCCTCCTGCACCTCTACCTTATGATATGGTCCTGGGAGGTCCAGCATCAACAGATTCTGAATCAGGCAGAGAAACAGTTAGTGGTAGTAGCTTTGAAACATTAATTACATGCAAAGATCCTGAAGAATCTGACTGTAAAATTAAAGCTAATTCAGCACCTATATCTCCAAGCAAGGCTGGATTGTCAAAATCTAAAGAATTTCATGCATTAGTAACAGAAGAAGAGGACGGCTGTCCAATTTGTCTTGAAGAGTATGATGTTGAGAATCCTAAAACTCTGACAAAATGTGAACACCACTTTCATCTGTCTTGCATTCTTGAGTGGATGGAAAGAAGTGACTCCTGTCCTATATGCGATCAGGAGATGATATTTGACCAGACATTGAACTAG 576 0.4219 MGGCCCSARKPHLHGTPVYYYCPPTLEEHESLTSNDGTATSLTTGLLVGLNLETSTPDTYHPPPAPLPYDMVLGGPASTDSESGRETVSGSSFETLITCKDPEESDCKIKANSAPISPSKAGLSKSKEFHALVTEEEDGCPICLEEYDVENPKTLTKCEHHFHLSCILEWMERSDSCPICDQEMIFDQTLN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00632 191 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHB1A-RELATED 1 191 - -
Gma07g00632 191 Pfam Ring finger domain 140 180 IPR001841 -
Gma07g00632 191 SMART ring_2 140 180 IPR001841 -
Gma07g00632 191 ProSiteProfiles Zinc finger RING-type profile. 140 181 IPR001841 -
Gma07g00632 191 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 191 - -
Gma07g00632 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 187 IPR013083 -
Gma07g00632 191 SUPERFAMILY RING/U-box 131 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00632 Gma-Chr7 6486928 6489832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00632 1 191 C3H Transcription Factor Family AT4G00335 61.257 6.59e-81 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00632 - - gmx:100792561 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00632 07 6486928 6489832 Gma16g00314 16 3297209 3300214 GST
Gma18g02169 18 55413824 55416082 Gma07g00632 07 6486928 6489832 PCT
Gma09g02353 09 48915225 48917278 Gma07g00632 07 6486928 6489832 PCT
Gma07g00632 07 6486928 6489832 Gma18g02169 18 55413824 55416082 PCT
Gma07g00632 07 6486928 6489832 Gma09g02353 09 48915225 48917278 PCT