Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00609 ATGTCACTATACGACGCCGCTTTTGTCGACACAGAGCTCTCCAAACGCACTTCCATCTTCGGCCTCCGCCTCTGGGTCGTCATCGGCATCCTCGTCGGATCCCTCATCATCGTCCACCTCCCCCCGCCCCCCGACACCGTCCACCTCCCCCCTCCGCCGCCGACAAAACCCGACCACCCTCGCTCCGCGGCTACGGCGGCGCTGTACTCGAGCGGGGAGAGCAGAGCAACCGCGAGTGCGTGCGAAACGGCGTCGTCGCTTGGAAGCGTGGGCCCCGAAGTGTCGCATCTCGGGTGGGGGAGGTGGTACACGCTCCGAGAACTCGAAGCCGCCACTAATGGGTTGTGCGAAGAGAACGTCATCGGCGAAGGTGGCTACGGAATCGTGTACCGTGGCTTGTTTCCCGATGGCACCAAGGTTGCTGTTAAGAACCTTTTGAATAACAAGGGCCAAGCTGAGAGAGAATTTAAAGTTGAGGTAGAAGCAATTGGTCGTGTGCGGCACAAGAATCTTGTTAGGTTGCTTGGATACTGTGTTGAGGGGGCATACAGGATGCTTGTGTATGAATATGTTGACAATGGGAATCTAGAACAGTGGCTGCATGGGGATGTTGGACCTGTAAGTCCAATGACATGGGATATCCGAATGAACATTATATTGGGCACGGCAAAAGGATTGGCTTATCTTCATGAAGGTCTTGAACCAAAAGTTGTCCACCGAGATGTGAAATCAAGCAACATACTCATTGATCGCCAGTGGAACCCAAAGGTTTCTGATTTTGGGCTTGCTAAGCTTTTGTCAGCGGATCATAGTTATGTCACTACTCGAGTGATGGGGACATTTGGTTATGTTGCACCAGAGTACGCATGCACTGGAATGCTGACTGAAAAGAGTGATGTGTATAGTTTCGGGATACTTATCATGGAATTAATTACTGGAAGAAGTCCTGTGGATTATAGTAAACCACAAGGAGAGGTTAATTTAATAGAGTGGTTGAAAAGTATGGTTGGGAATCGAAAATCTGAGGAAGTAGTTGATCCTAAGATTGCTGAAAAGCCATCTTCAAAGGCTCTTAAACGGGCTTTGTTGGTTGCTCTTCGATGTGTCGACCCTGATGCAGCAAAGAGGCCTAAAATAGGACATGTGATCCACATGCTCGAGGCTGAGGACCTCTTATTCCGTGATGATCGAAGGACTGGAGGAGAATCCTCCCGTTCCCATCGCGATTATCAACTAGAGCAGAAGGACTCAAAATTAGATAAAAGGCAGATAGGTGGAGAGATCACTGATCAAAGTGAAGATGACAGTACTACTAGTAGTAGACATCACCCTCAACCCCATAGATCGAGATAA 1353 0.4959 MSLYDAAFVDTELSKRTSIFGLRLWVVIGILVGSLIIVHLPPPPDTVHLPPPPPTKPDHPRSAATAALYSSGESRATASACETASSLGSVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYRGLFPDGTKVAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGPVSPMTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILIDRQWNPKVSDFGLAKLLSADHSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMELITGRSPVDYSKPQGEVNLIEWLKSMVGNRKSEEVVDPKIAEKPSSKALKRALLVALRCVDPDAAKRPKIGHVIHMLEAEDLLFRDDRRTGGESSRSHRDYQLEQKDSKLDKRQIGGEITDQSEDDSTTSSRHHPQPHRSR 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00609 450 PANTHER OS01G0323000 PROTEIN 65 431 - -
Gma07g00609 450 Pfam Protein kinase domain 118 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00609 450 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 39 - -
Gma07g00609 450 MobiDBLite consensus disorder prediction 397 442 - -
Gma07g00609 450 SUPERFAMILY Protein kinase-like (PK-like) 92 387 IPR011009 -
Gma07g00609 450 Gene3D Transferase(Phosphotransferase) domain 1 191 399 - -
Gma07g00609 450 MobiDBLite consensus disorder prediction 47 68 - -
Gma07g00609 450 MobiDBLite consensus disorder prediction 397 450 - -
Gma07g00609 450 Gene3D Phosphorylase Kinase; domain 1 95 190 - -
Gma07g00609 450 SMART serkin_6 115 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00609 450 ProSitePatterns Protein kinases ATP-binding region signature. 121 143 IPR017441 GO:0005524
Gma07g00609 450 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 65 431 - -
Gma07g00609 450 ProSiteProfiles Protein kinase domain profile. 115 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00609 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Gma07g00609 450 CDD STKc_IRAK 121 387 - -
Gma07g00609 450 PANTHER OS01G0323000 PROTEIN 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00609 Gma-Chr7 6261765 6265432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00609 102 387 Trihelix Transcription Factor Family AT5G38560 47.945 5.51e-93 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gma07g00609 Pkinase 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00609 - - gmx:100305432 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00609 07 6261765 6265432 Gma16g00294 16 3116641 3120886 GST
Gma19g02367 19 52285555 52288762 Gma07g00609 07 6261765 6265432 PCT
Gma03g02326 03 48510187 48512629 Gma07g00609 07 6261765 6265432 PCT
Gma18g02186 18 55616125 55619870 Gma07g00609 07 6261765 6265432 PCT
Gma09g02342 09 48800727 48804347 Gma07g00609 07 6261765 6265432 PCT
Gma07g00609 07 6261765 6265432 Gma18g02186 18 55616125 55619870 PCT
Gma07g00609 07 6261765 6265432 Gma09g02342 09 48800727 48804347 PCT