Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00562 ATGGGAAACAGTGAGGATGAGAAATCTGTTAAGACTGGAAGCCCTTCTTCTTCACCTGCAACAACTGATCAGACCAACCAACCTAATATTCATGTCTATCCTGATTGGGCTGCCATGCAGTATTATGGGCCAAGAGTCAACATTCCACCATACTTCAACTCAGCTGTGGCTTCAGGTCATGCTCCACACCCATACATGTGGGGACCACCACAGCCTATGATGCCACCTTATGGGCCACCTTATGCAGCATTTTATTCGCATGGAGGGGTTTATACTCACCCTGCAGTTGCTATTGGGCCACACTTACATGGTCAAGGAGTTTCATCTTCACCTGCTGTTGGGACTCATTCAAGCATAGAATCACCAACCAAATTATCTGGAAATACTGATCAGGGTTTAATGAAGAAATCAAAAGGGTTTGATGGGCTTGCAATGTCAATAGGCAATTGCAATGCTGAGAGTGCTGAGCATGGAGCTGAGAACAGGCAGTCACAGAGTGTGGATACTGAGGGTTACAGCGACGGAAGTGATGGCAACACTGCAGGGGCTAATCAAACAAAAAGGAAAAGATGCCGAGAGGGAACACTGACCACTGCAGATGGAGAAGGGAAAACTGAGCTACAAAATGGTCCGGCTTCCAAAGAGACTTCATCTTCCAAAAAGATTGTGTCAGCTACTCCAGCTAGTGTTGCCGGAACATTAGTTGGACCTGTAGTTTCTTCAGTTATGGCCACAACACTGGAACTGAGGAACCCTTCGACTGTTGATTCTAAGGCAAATTCCACAAGTGCCCCACAACCTTGTGCAATTGTGCCTAATGAAACTTGCTTACAGAATGAGCGTGAGCTGAAACGGGAGAGGAGAAAACAATCTAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCCGAGACTGAAGAATTGGCACGAAAAGTTGATATGTTAACTGCTGAGAATGTGTCCCTGAAGTCAGAAATAATTCAACTGACTGAAGGTTCTGAGCAGATGAGGATGGAAAATTCTGCATTGAGGGAAAAACTGAGAAATACTCAACTGGGACAAAGGGAAGAGATAATTTTGAGTAGCATCGAGAGTAAGAGGGCTGCACCTGTAAGTACAGAAAACTTGTTATCAAGAGTTAATAATTCTAGTTCTAATGACAGAACTACAGAGAATGAGAATGATTTCTGTGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTATTGGATACAAATCCTAGAGCAGATGCTGTGGCAGCTGGTTGA 1278 0.4468 MGNSEDEKSVKTGSPSSSPATTDQTNQPNIHVYPDWAAMQYYGPRVNIPPYFNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAFYSHGGVYTHPAVAIGPHLHGQGVSSSPAVGTHSSIESPTKLSGNTDQGLMKKSKGFDGLAMSIGNCNAESAEHGAENRQSQSVDTEGYSDGSDGNTAGANQTKRKRCREGTLTTADGEGKTELQNGPASKETSSSKKIVSATPASVAGTLVGPVVSSVMATTLELRNPSTVDSKANSTSAPQPCAIVPNETCLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVDMLTAENVSLKSEIIQLTEGSEQMRMENSALREKLRNTQLGQREEIILSSIESKRAAPVSTENLLSRVNNSSSNDRTTENENDFCENKPNSGAKLHQLLDTNPRADAVAAG 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00562 425 Pfam Disordered region downstream of MFMR 130 259 - -
Gma07g00562 425 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 287 302 IPR004827 GO:0003700|GO:0006355
Gma07g00562 425 MobiDBLite consensus disorder prediction 379 425 - -
Gma07g00562 425 CDD bZIP_plant_GBF1 285 333 IPR045314 GO:0003700|GO:0006355
Gma07g00562 425 Gene3D - 283 336 - -
Gma07g00562 425 Coils Coil 307 327 - -
Gma07g00562 425 MobiDBLite consensus disorder prediction 253 273 - -
Gma07g00562 425 MobiDBLite consensus disorder prediction 278 309 - -
Gma07g00562 425 MobiDBLite consensus disorder prediction 156 185 - -
Gma07g00562 425 SMART brlzneu 280 344 IPR004827 GO:0003700|GO:0006355
Gma07g00562 425 Pfam bZIP transcription factor 280 342 IPR004827 GO:0003700|GO:0006355
Gma07g00562 425 MobiDBLite consensus disorder prediction 107 136 - -
Gma07g00562 425 PANTHER G-BOX-BINDING FACTOR 3 1 425 - -
Gma07g00562 425 SUPERFAMILY Leucine zipper domain 283 338 IPR046347 GO:0003700|GO:0006355
Gma07g00562 425 MobiDBLite consensus disorder prediction 253 309 - -
Gma07g00562 425 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Gma07g00562 425 MobiDBLite consensus disorder prediction 108 133 - -
Gma07g00562 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 282 345 IPR004827 GO:0003700|GO:0006355
Gma07g00562 425 MobiDBLite consensus disorder prediction 201 225 - -
Gma07g00562 425 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 425 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gma07g00562 425 MobiDBLite consensus disorder prediction 154 225 - -
Gma07g00562 425 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00562 Gma-Chr7 5424935 5428247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00562 1 425 bZIP Transcription Factor Family AT2G46270 48.380 2.62e-108 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma07g00562 MFMR_assoc 2.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00562 K09060 - gmx:100820423 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00562 07 5424935 5428247 Gma07g00562 07 5424935 5428247 ECH
Gma07g00562 07 5424935 5428247 Gma16g00262 16 2786587 2789818 GST