Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00549 ATGAGCACTCAGTCACAACAACACAACAAAAGAGAATTCAAGGGAGAAGAAGAGGAAGAGGAAGAAGAAGAAAACCATTTGTTACATTCAGAATGCGAGACAATACCATTTTCCTCACCCAACACATCACCCTCAGAGTGGGAACATGGAAACAAAGAAGAAGAAGAAGAAGAAGAGAAGGACACGGTGTATGCAGCCAAGGACAAGGTGCAGATATTCGACCTGGAGTCTGCCGGTGGTGTAAGGGAAGGGTCCACAGCGGTGCCACCTTTTTCGTGGAGGAAGCTGTGGCTGTTCACCGGGCCGGGGCTGTTGATGAGCGTGGCGTTTTTGGACCCGGGGAACCTTGAAGGGGACCTTCAGGCTGGAGCCATTGCAGGGTACACGTTGCTTTGGTTGTTGATGTGGTCTACCATCATGGGGCTGGTGATACAGCTTCTGTCGGCAAGGCTTGGGGTGGCGACCGGGCGGCACCTGGCGGAGCTGTGCCGGGAGGAGTACTCCAATTGGGCCAGGTTGGTGCTGTGGATCTTGGCGGAGCTGGCTCTCATTGCTGCTGATATTCAAGAGGTTATTGGCAGTGCTATTGCTCTCAAGATTCTTAGCCATGGACTTCTCCCCATTTGGGCTGGTGTGATTATCACAGCCATGGATTGTTTCTTCTTTCTATTTCTCGAGAACTATGGAGTGAGGAAGTTAGAAGGTGTATTCGCAGTTTTCATTGGAACTATGGGCTTTTCTTTTGCGTGGATGTTCTTCAATACAAATCCCAGTGAAGAAGAACTACTGATGGGCCTTTTGATCCCAAGAGTTAATTCGAAAACACTTCGGCAGGCTGTGGAAATTGTGGGGTGTGTGATAACCCCCCACAATGTGTTCCTCCATTCTGCATTAGTACAATCAAGGGACATTGATATCCGTAACAAAGGCCAGGTTCAAGAGGCTATAAACTACTACTCAATTGAGTCCTCGGTTGCACTTTTAGTCACATTGGTGATCAATCTATTTGTGATAACTGTTTTCGCTAGGGTGTTCTATGGTACAGAACAGGCCAAAGGCATAGGATTGGTAAATGCAGGGCAGTATCTTCAGGAGAGGTATGGAGGAGGGTTGTTTCCAATTCTCTATATATGGGGTATTGGTTTGTTAGCAGCTGGACAAAGTAGTACCATCACAGGCACATATGCAGGGCAGTTTATAACAGAGGGTTTTCTCAAGCTCAATATAAAGAAGTGGTTGAGGGCATTGATTACAAGAAGTTGTGCAATTGTTCCAACTATGATTTGTGCAATTGTTTTTAATACCTCAGAAGGTTCTTTGGATACCTTGAATGAATGGCTTAATGTGGTCCAAGCAATACAGATTCCTTTTGCACTTATTCCCCTTCTTACTTTGGTGTCCAAAGAGGAGGTAATGGGGACCTTCAGAATAGGGCCTATAGTAGAGGTAAGCAAGCTCTCCATCTAA 1467 0.4635 MSTQSQQHNKREFKGEEEEEEEEENHLLHSECETIPFSSPNTSPSEWEHGNKEEEEEEEKDTVYAAKDKVQIFDLESAGGVREGSTAVPPFSWRKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIAGYTLLWLLMWSTIMGLVIQLLSARLGVATGRHLAELCREEYSNWARLVLWILAELALIAADIQEVIGSAIALKILSHGLLPIWAGVIITAMDCFFFLFLENYGVRKLEGVFAVFIGTMGFSFAWMFFNTNPSEEELLMGLLIPRVNSKTLRQAVEIVGCVITPHNVFLHSALVQSRDIDIRNKGQVQEAINYYSIESSVALLVTLVINLFVITVFARVFYGTEQAKGIGLVNAGQYLQERYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLNIKKWLRALITRSCAIVPTMICAIVFNTSEGSLDTLNEWLNVVQAIQIPFALIPLLTLVSKEEVMGTFRIGPIVEVSKLSI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00549 488 MobiDBLite consensus disorder prediction 1 62 - -
Gma07g00549 488 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 94 472 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma07g00549 488 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 25 484 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma07g00549 488 Pfam Natural resistance-associated macrophage protein 117 478 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma07g00549 488 PRINTS Natural resistance-associated macrophage protein signature 448 467 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma07g00549 488 PRINTS Natural resistance-associated macrophage protein signature 205 224 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma07g00549 488 PRINTS Natural resistance-associated macrophage protein signature 414 431 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma07g00549 488 PRINTS Natural resistance-associated macrophage protein signature 175 201 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma07g00549 488 PRINTS Natural resistance-associated macrophage protein signature 279 302 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma07g00549 488 PRINTS Natural resistance-associated macrophage protein signature 386 405 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma07g00549 488 PRINTS Natural resistance-associated macrophage protein signature 230 251 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma07g00549 488 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 25 484 - -
Gma07g00549 488 MobiDBLite consensus disorder prediction 32 46 - -
Gma07g00549 488 Hamap Divalent metal cation transporter MntH [mntH]. 82 487 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00549 Gma-Chr7 5334771 5337191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00549 57 482 Inorganic Solute Cotransporters AT1G47240 74.883 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00549 K21398 - gmx:100801411 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00549 07 5334771 5337191 Gma16g00252 16 2725547 2728346 GST