Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00544 ATGGAACAATTTAGACAAATTGGGGAAGCACTAGGGGGTTTGAAATTTGTGATGTGTATTGCTGATGAGATTACACAGAACCTGAAATTTGAAGAGAAGAATGGGAAGTGGAAGGTTCTAGAACATCCCTTTAGAGAGATCCATAAAATTTTCGGAGAAGAAGAAGCTTACATTAGGCATTGCATGGAAACAAAGGACTGGTGGGCTAAAGCCATTGCCTTGTGGCACAACACGATTGTTACCTCATCACTCATTATCTGCCACCGATATGATACGGTTCGGAAGGAAGATAGGTTCCTTTACAACAAAATCCATGAAAAGAAAGTGGAAGGTATAACAATGTATGAGAAGAAATTGATAGATTTGCTTTTGAGGAATTTGGAAAGGTCAGAATCACTGGTAGGGAGGCTCTTGCCAAGTTCAACATTGGTTGGATCTAAGGACTATCAGGTGAGGAGAAAAAAGGGGAATGCGAGTCAGTACAAGGAGATTACATGGTTAGGTGAAAGCTTTGTCATAAGACATTTTTCTTGTGACATTGAAGCTTTGGAACCTGAGATCATAGAACTTTTATCGCTTTCCCATCCTAATATAATGGACAGCCTTTTTGGTTTTACTGATGAGGAGAAGAAGGAATGTTTTTTGATTGCCAGGGGAATGGAGTATTTGCATTCAAAGAAAGTATATCATGGAGAACTGAACCCTTCAAGCATTCTTGTCAAGCCTAGAGGTACATCCCCAGAAGGTTACTTGCACGCCAAGGTAACAGGGTTTGGACTAACTTCTGTCAAGGACTTGAACCAGAAAGGGAACACAAATCAGAATGGAACTCCCCCATTCATCTGGTACTCTCCAGAAGTACTTGAAGAGCAAGATCATTCAGGGGGTGCAGCAAACTCCAAGTACACAGAAATCTGA 918 0.4096 MEQFRQIGEALGGLKFVMCIADEITQNLKFEEKNGKWKVLEHPFREIHKIFGEEEAYIRHCMETKDWWAKAIALWHNTIVTSSLIICHRYDTVRKEDRFLYNKIHEKKVEGITMYEKKLIDLLLRNLERSESLVGRLLPSSTLVGSKDYQVRRKKGNASQYKEITWLGESFVIRHFSCDIEALEPEIIELLSLSHPNIMDSLFGFTDEEKKECFLIARGMEYLHSKKVYHGELNPSSILVKPRGTSPEGYLHAKVTGFGLTSVKDLNQKGNTNQNGTPPFIWYSPEVLEEQDHSGGAANSKYTEI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00544 305 SUPERFAMILY Protein kinase-like (PK-like) 165 293 IPR011009 -
Gma07g00544 305 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-LIKE 86 213 - -
Gma07g00544 305 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-LIKE 216 304 - -
Gma07g00544 305 Pfam Protein tyrosine and serine/threonine kinase 213 292 IPR001245 GO:0004672|GO:0006468
Gma07g00544 305 Gene3D Transferase(Phosphotransferase) domain 1 206 303 - -
Gma07g00544 305 PANTHER SERINE-THREONINE PROTEIN KINASE 86 213 - -
Gma07g00544 305 PANTHER SERINE-THREONINE PROTEIN KINASE 216 304 - -
Gma07g00544 305 ProSiteProfiles Protein kinase domain profile. 90 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00544 305 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-LIKE 21 78 - -
Gma07g00544 305 Pfam Protein of unknown function (DUF1221) 18 78 IPR010632 -
Gma07g00544 305 Pfam Protein of unknown function (DUF1221) 86 146 IPR010632 -
Gma07g00544 305 PANTHER SERINE-THREONINE PROTEIN KINASE 21 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00544 Gma-Chr7 5273100 5275716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00544 216 287 MAP Kinase Kinase Kinase AT3G50720 41.667 4.74e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Gma07g00544 PK_Tyr_Ser-Thr 1.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00544 - - gmx:100813704 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00544 07 5273100 5275716 Gma07g00544 07 5273100 5275716 ECH
Gma07g00544 07 5273100 5275716 Gma16g00245 16 2662574 2665754 GST