Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00529 ATGCCTACAAAGCTATTCTCCCAACTACATCTTCTCCATCCCCTCCTCCCCATGAAGCCCCGCACTCTCCCCCTTCTCTCCAGACCCTTCTTCTTCCCTTCCTCCAAGTTCCTCCGAACCTCACCGTTTAAGGTTCGCGCCTTCTCCTCCCGGGAGAAGGTTCCCCTCCGCCCCTCCAAGAGCCTCATCGACGACGAGGCCGACCTCAGCAACTGGGTTGACGAATTGCGCTCCGGCGGGCCCGATGAAATGCGGTCTGGCCGGGGCAATGAAGTGCGGACCGGTCGGAGAGACCGGTTTGCCGATTCTGGCCGGTTCAGCCGCGATGACAGGGAACGCGAATTCCGGCCGCCGAGGAATAATAACCGGGCTTCCGCGTTGGGGAAGAGAAGGGGCGAGGATTTGAGGAAGGGGGGACAGAGTGTCGGTTCGAGGAGAAAGTTTCAACCGAGGAGTGATGATGATGATAACGAGGTAATGAATGGAAGAAAGTTGAAGGGTGGTGGCGTTGGAGCCTTTCCTAGCGAGGATGAGGATGAAGATGAAGACGAAGAGAGTGAAGGGAGTGAGGAGGAAGAGATATTGAACAAGAGTAGAACCGCTTTGTTTGGTCAACAAAACGTTTTGAACCGGAGGAACACCGAACCAACTCCAAGACCTTCTTCTCCTGGAGGAGGATCTGATTCTTATTTGAGTGAAACCAGATTTGACCAATGTTCAATCTCCCCACTGTCATTAAAAGGAGTCAAGGATGCTGGATATGAGAAAATGACGGTTGTTCAGGAGGCTACTCTTCCAGTAATTCTCAAAGGTAAGGATGTCCTTGCCAAGGCCAAGACAGGCACCGGAAAAACAGTAGCCTTTTTGCTTCCATCAATTGAAGTTGTGGCAAAGTCACCTCCAAGTGATCGTGATCATAGGCGGCCACCAATTGCTGTTCTTGTCATATGCCCAACTCGAGAACTTGCAAGTCAAGCTGCTGCAGAGGCCACTAAACTGCTGAAGTATCATCCTACCATTGGTGTTCAAGTTGTGATTGGAGGGACAAGACTTGCGTTAGAGCAGAAACGAATGCAAGCAAACCCCTGCCAAATCCTTGTTGCCACACCTGGAAGGCTTAGAGATCATACTGAGAATACTGCTGGTTTTGCAACTAGGCTGATGGGTGTGAAGGTCTTGGTGCTTGATGAAGCTGATCATTTACTAGACATGGGATTTCGCAAAGACATTGAGAAGATAATTGCTGCGGTCCCTAAACAACGACAAACTCTTATGTTTTCTGCCACTGTTCCAGAAGAGGTCCGTCAAGTATGTCATATTGCTTTGAGAAGGGATCATGAATTTATCAATACAGTTCAAGAGGGAACGGAGGAGACACATTCACAGGTCTGCCAGACGCATTTAGTTGCCCCATTGGACAAGCATTTCTCTTTACTATATGTTCTTCTGAAGGACCACATTGCAGATGATGTTGATTACAAGGTCCTTGTTTTCTGCACAACTGCTATGGTCACTAGACTTGTTGCTGAACTTCTTGGTGAGTTGAACTTGAATGTGAGAGAAATCCATTCAAGAAAGCCTCAGAGTTACAGAACCAGAGTCTCTGAGGAATTTCGGAAGTCAAAGGGTCTCATCCTGGTTACTTCAGATGTATCTGCACGTGGAGTTGATTATCCAGATGTCACTCTTGTTATACAGGTTGGTTTGCCAGCAGATAGAGAACAGTATATACATAGACTCGGTAGAACAGGGCGAAGAGGGAAAGAAGGGCAGGGCATACTGCTGCTGGCTCCTTGGGAAGACTTCTTTTTATCTACCGTAAAAGATTTGCCTATTGAGAAAGCTCCTGTAGTACCTTCAGTTGATCCTGACACCAAGAAAAAGGTGGAAAAAGCCCTATCCAATGTGGAGATGAAGAATAAAGAAGCAGCATATCAGGCGTGGCTTGGTTACTACAATTCCAACAAAAAAGTGGGGCGTGACAAGTACAGGCTAGTGGAGCTTGCAAACGAGTTTAGTCGAAGCATGGGGCTTGATAACCCTCCAGCTATACCTAAGCTAGTCCTTGGCAAGATGGGCCTCAGGAATATCCCTGGTTTACGGGCAAAATAG 2112 0.4811 MPTKLFSQLHLLHPLLPMKPRTLPLLSRPFFFPSSKFLRTSPFKVRAFSSREKVPLRPSKSLIDDEADLSNWVDELRSGGPDEMRSGRGNEVRTGRRDRFADSGRFSRDDREREFRPPRNNNRASALGKRRGEDLRKGGQSVGSRRKFQPRSDDDDNEVMNGRKLKGGGVGAFPSEDEDEDEDEESEGSEEEEILNKSRTALFGQQNVLNRRNTEPTPRPSSPGGGSDSYLSETRFDQCSISPLSLKGVKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEVVAKSPPSDRDHRRPPIAVLVICPTRELASQAAAEATKLLKYHPTIGVQVVIGGTRLALEQKRMQANPCQILVATPGRLRDHTENTAGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKQRQTLMFSATVPEEVRQVCHIALRRDHEFINTVQEGTEETHSQVCQTHLVAPLDKHFSLLYVLLKDHIADDVDYKVLVFCTTAMVTRLVAELLGELNLNVREIHSRKPQSYRTRVSEEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGRRGKEGQGILLLAPWEDFFLSTVKDLPIEKAPVVPSVDPDTKKKVEKALSNVEMKNKEAAYQAWLGYYNSNKKVGRDKYRLVELANEFSRSMGLDNPPAIPKLVLGKMGLRNIPGLRAK 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00529 703 MobiDBLite consensus disorder prediction 174 191 - -
Gma07g00529 703 Gene3D - 457 681 IPR027417 -
Gma07g00529 703 Pfam Helicase conserved C-terminal domain 482 587 IPR001650 -
Gma07g00529 703 SMART ultradead3 253 463 IPR014001 -
Gma07g00529 703 PANTHER RNA HELICASE 196 701 - -
Gma07g00529 703 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 311 602 IPR027417 -
Gma07g00529 703 CDD DEADc_MSS116 241 450 - -
Gma07g00529 703 SMART helicmild6 506 587 IPR001650 -
Gma07g00529 703 MobiDBLite consensus disorder prediction 78 232 - -
Gma07g00529 703 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 265 448 IPR014001 -
Gma07g00529 703 MobiDBLite consensus disorder prediction 199 232 - -
Gma07g00529 703 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 25 196 701 - -
Gma07g00529 703 CDD SF2_C_DEAD 465 596 - -
Gma07g00529 703 Gene3D - 184 449 IPR027417 -
Gma07g00529 703 MobiDBLite consensus disorder prediction 126 162 - -
Gma07g00529 703 Pfam DEAD/DEAH box helicase 259 436 IPR011545 GO:0003676|GO:0005524
Gma07g00529 703 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 234 262 IPR014014 GO:0003724
Gma07g00529 703 MobiDBLite consensus disorder prediction 78 119 - -
Gma07g00529 703 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 482 630 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00529 Gma-Chr7 5094179 5100142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00529 234 618 Eukaryotic Initiation Factors Gene Family AT3G19760 28.967 8.21e-47 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00529 - - gmx:100795739 1300.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00529 07 5094179 5100142 Gma07g00529 07 5094179 5100142 ECH
Gma07g00529 07 5094179 5100142 Gma16g00231 16 2497991 2503876 GST