Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00515 atgacttttggGGGTTCTGATGAGGACAATTATGCTTTTGGGTTGGACCGCGTGACCGACACAGAGATGTTCTTTCTTGCTTCCATGTACTTCTCTTTTCCCCGGGGGCTTGGGGGTCCAGGTAAGTGTTTTGCTTCTGGGAAGCATTTGTGGGTTTCGGATGTGTTGAAATCTAGTTTTGATTACTGTGTGAGGTCTTTCTTGGCCAAATCTGCTGGGATTCAGACTGTTGTTTTAGTGCCTACTGATTTTGGGGTGGTGGAGATGGGGTCTGTGAGGATGGTTGGTGAGAGTTTTGAGTTGTTGCAGGCTGTGAAATCTGTGTTTTCTGCACAGGCATCATCATTATTAGTCCCCCACATGGTTAAGCCAATTGCACCGTTGGATTTGGTGAGGGAAAAGAGAGATGGGAGTGAGAGTGCAAATGCTCTTTTATCTGGTTTGGCAATTGGGGATAAGAATAAGAATATTAATAACAATAGTAGAGTAGAGGGAATTGGAGTTCCGAAGATTTTTGGGCAGGATTTGAATTGTGTGACTCAATTTAGGGAGAAACTTGCTGTGAGGAAAATGGAGGAGAGGCCGAGGCCATGGGGAGGCCATCCCCCCAATGTGAATAGTATTGGCTTTCCGAACGGTGTTCAGGGTTCTAGTTGGGGGGCTGGTCAAGTTGTGAGGCATCTTGGTCCTCCTGAAATGCTTGCTCCTAGGTTGGCCAGCTCCGGCACATTGCCAAAGCTGGCCAATGGTGCGAGGCATGACTTTGTGCATAACAACTTTGAGCAGCAACGGCCGGTACAGATGCAAATTGATTTCTCAGGAGCCACTTCGAGGGCAGCTTCTGGGAGATCAATAATTGCCGAGTCTGAGATTTCTGATGTTGAGGCGACGTGCAAGGAGGAGAGAGTTAGTGTTGCCGATGACAGGAGGCCGAGGAAGCGGGGGAGGAAGCCGGCTAATGGAAGGGAGGAACCCCTCAATCATGTGGAGGCAGAGAGGCAAAGGCGGGAGAAGCTGAACCAGCGGTTCTATGCATTGCGAGCTGTTGTTCCAAATATCTCTAAGATGGACAAGGCATCACTGTTGGGAGATGCTATTGCTTACATCAATGAACTTCAAGCAAAACTCAAGACCATAGAATCTGAGAGAGAGAGGTTTGGAAGCACCTCTATGGATGGACCAGAATTGGAGGCCAATGCAAGAGTAGAAAATCATCATAATGGAACTCCTGATGTGGATGTTCAAGTTGCACAAGATGGGGTCATTGTAAAGTTAAATCCCAAGGACCTGATCAGCTGA 1299 0.4742 MTFGGSDEDNYAFGLDRVTDTEMFFLASMYFSFPRGLGGPGKCFASGKHLWVSDVLKSSFDYCVRSFLAKSAGIQTVVLVPTDFGVVEMGSVRMVGESFELLQAVKSVFSAQASSLLVPHMVKPIAPLDLVREKRDGSESANALLSGLAIGDKNKNINNNSRVEGIGVPKIFGQDLNCVTQFREKLAVRKMEERPRPWGGHPPNVNSIGFPNGVQGSSWGAGQVVRHLGPPEMLAPRLASSGTLPKLANGARHDFVHNNFEQQRPVQMQIDFSGATSRAASGRSIIAESEISDVEATCKEERVSVADDRRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKTIESERERFGSTSMDGPELEANARVENHHNGTPDVDVQVAQDGVIVKLNPKDLIS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00515 432 MobiDBLite consensus disorder prediction 302 327 - -
Gma07g00515 432 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 10 109 IPR025610 -
Gma07g00515 432 Coils Coil 369 389 - -
Gma07g00515 432 Pfam Helix-loop-helix DNA-binding domain 327 373 IPR011598 GO:0046983
Gma07g00515 432 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 323 372 IPR011598 GO:0046983
Gma07g00515 432 CDD bHLH_AtAIB_like 320 385 - -
Gma07g00515 432 PANTHER ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR 1 425 - -
Gma07g00515 432 PANTHER MYC 1 425 IPR045084 GO:0003700|GO:0006355
Gma07g00515 432 SMART finulus 329 378 IPR011598 GO:0046983
Gma07g00515 432 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 326 386 IPR036638 GO:0046983
Gma07g00515 432 Gene3D - 316 388 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00515 Gma-Chr7 4947616 4949038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00515 3 426 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 45.455 2.12e-105 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma07g00515 bHLH-MYC_N 2.7e-30 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00515 - - gmx:100807078 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00515 07 4947616 4949038 Gma07g00515 07 4947616 4949038 ECH
Gma07g00515 07 4947616 4949038 Gma16g00214 16 2329955 2331693 GST
Gma19g02418 19 52666677 52669073 Gma07g00515 07 4947616 4949038 PCT
Gma03g02374 03 48860531 48861949 Gma07g00515 07 4947616 4949038 PCT
Gma07g00515 07 4947616 4949038 Gma19g02418 19 52666677 52669073 PCT
Gma07g00515 07 4947616 4949038 Gma03g02374 03 48860531 48861949 PCT