Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00514 ATGGAGCAAGAGCTTCCACGCAGTAGCGTCCCCGACGACGCCACCGCCGCCACCACGAGCTCCGTTGACAAGCCCGCCACTCCTCACGCCGGAGGCACCCGCCACCCGCTCTTCCGCGGCGTCCGCAAGCGCCGCTGGGGCAAATGGGTCTCCGAAATCCGGGAGCCGAGGAAAAAGTCACGCATATGGCTCGGCTCCTTCCCGGCGCCGGAGATGGCGGCGAAGGCCTACGACGTTGCCGCCTACTGCCTCAAGGGCTGCAAGGCGCAGCTCAACTTCCCCGACGAGGTCCACCGGCTTCCGCCGCTCCCCTCCTCCTGCACCGCCCGGGACATCCAGGCCGCCGCAGCCAAGGCCGCCCACATGATGATGGTCCAGGCTGCCTCCGCCGACTCGCCGGAGAAAAGCAGCAGCATTACCTCCGACTGCGACGGCAGCGGTGGTGACGACTTCTGGGGCGAAATTGAGCTGCCAGAACTGCTCAACGGCAAGTGGTGGGCCTCCGACCGCCACGTAACGCCGTGGCCGGAGACTGAGCTTCCGCCCCAGCTGCCCTTCACCACGGCGTGCTTGTAG 576 0.6753 MEQELPRSSVPDDATAATTSSVDKPATPHAGGTRHPLFRGVRKRRWGKWVSEIREPRKKSRIWLGSFPAPEMAAKAYDVAAYCLKGCKAQLNFPDEVHRLPPLPSSCTARDIQAAAAKAAHMMMVQAASADSPEKSSSITSDCDGSGGDDFWGEIELPELLNGKWWASDRHVTPWPETELPPQLPFTTACL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00514 191 Gene3D AP2/ERF domain 37 95 IPR036955 GO:0003700|GO:0006355
Gma07g00514 191 Pfam AP2 domain 36 86 IPR001471 GO:0003700|GO:0006355
Gma07g00514 191 SUPERFAMILY DNA-binding domain 37 96 IPR016177 GO:0003677
Gma07g00514 191 CDD AP2 36 95 IPR001471 GO:0003700|GO:0006355
Gma07g00514 191 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Gma07g00514 191 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 2 191 - -
Gma07g00514 191 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Gma07g00514 191 MobiDBLite consensus disorder prediction 1 39 - -
Gma07g00514 191 MobiDBLite consensus disorder prediction 12 26 - -
Gma07g00514 191 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Gma07g00514 191 PRINTS Ethylene responsive element binding protein signature 76 96 IPR001471 GO:0003700|GO:0006355
Gma07g00514 191 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 2 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00514 Gma-Chr7 4918365 4919238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00514 33 165 AP2-EREBP Transcription Factor Family AT1G01250 65.441 7.76e-49 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma07g00514 AP2 6.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00514 K09286 - gmx:100806544 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00514 07 4918365 4919238 Gma07g00514 07 4918365 4919238 ECH
Gma07g00514 07 4918365 4919238 Gma16g00213 16 2307728 2308635 GST
Gma19g02419 19 52682584 52683273 Gma07g00514 07 4918365 4919238 PCT
Gma03g02375 03 48872285 48872839 Gma07g00514 07 4918365 4919238 PCT
Gma07g00514 07 4918365 4919238 Gma19g02419 19 52682584 52683273 PCT
Gma07g00514 07 4918365 4919238 Gma03g02375 03 48872285 48872839 PCT