Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00512 ATGGCTCATCTGGAGTGTAATCTTGGGGGCCCTGGGAGTAGTGGAACTTCTCAACCGGAAAAAGGTTTGAAGGATGATGATCTGTATAGAGAGCTGTGGAAGCTATGTGCAGGGCCATTGGTGGATGTTCCTCGTAATGGGGACAGAGTTTTCTACTTCCCTCAAGGTCACATGGAACAATTGCAAGCATCTACGGATCAGGAATTGAACCAGGAAATTCCCCATTTCAATCTCCCGGCCAAGATTTTTTGCCGTGTTGTGAACATTCAGCTGTTGGCGGAACAAGACACTGATGAGGTTTATGCTTGCATCGCTTTACTTCCAGAATCAGATCAAACTGAGCCTACAAACCCTGATCCAAATGTTTCTGAGGCCCCAAAACAGAAGTTTCACTCATTTTGCAAGATATTAACTGCCTCTGATACTAGCACACATGGAGGATTTTCAGTTTTGCGGAAGCATGCTACTGAGTGCCTGCCTGAATTGGACATGACTCAATCAACCCCTACTCAGGAGTTGGCAGCAAAGGATCTTCATGGATTTGAGTGGAAGTTTAAGCATATATATAGGGgtcaaccaaggaggcatttgcttacaactggttggagtactttcgttgcatctaaaagattggttgctggagatgcttttgtgtttctaagGGGAGAGCATGGACAATTGAGAGTTGGTGTCAGACGTTTAGCGCGGCAGCAGAGTCCTATGCCTTCATCTGTGATATCAAGCCAGAGCATGCATCTCGGCGTGCTTGCCACTGCTTCCCATGCTGTCATGACTCGTACAATGTTTTTGGTTTATTATAAGCCAAGGACTAGCCAGTTTATTGTTGGTTTGAACAAATATCTGGAGGCAGTCAACAATAAATTTTCACTCAGCATGCGATTCAAGATGCGATTCGAGGGAGATGACTCACCTGAGAGAAGATTTTCCGGTACTATTGTTGGGGTTGGAGACGTGTCTGCAGGGTGGTCAAATTCTCAGTGGCGCTCATTGAAGGTTCAATGGGATGAACCAGCAACAATTCCAAGGCCAGATAGAGTTTCTTGTTGGGAGATAGAGCCTTTTGTAGCTTCTACTGCTTTGAATGTCACACAACCAGCAGTTAAGGGTAAAAGGTCTAGGCCTGCTGATGTTTTATCTTCTGCTGCTTCAGGTTTCTGGTATCATGGTTCTTCCAATGAGCTTAGTCAATTAGGTGCTGCTGCTGAGGTCCAAAGCAAGGAAAATCAGGTTGTTCCATGCTCTCTGAGGCAGAAAGACATTATTAATAGCAATCCTATTAATGCTAATAACTCTAGCATCAGTACTAGAGTCCGAATGGAAGGAGTATGGCCTTCTTCACCACATTTGAATGCCACTCCAAACCTTTTTTCTGATCCCAATAACAACAACAGCAACAACGGCGTTTCGGCACGATCACTGATCTCTGGTTATCCTAATGTTCCATCTAGATCAAGTGATGGTCCCACATGCGACGGTGTGGAAGATGGGAAAAAGACTGAGAACTCCCTTGATTGCTGGTTATTTGGAGTTAATTTGACTAACAATTGTAGCAACGTTATTACTACTCCTTCAGAGAGGGAACAGAGAGGTCCAAGCTCAAGTGTTGTTCTTAGTGGTCCCAAAGAATCTATTCCTGCAGCTGCATGTGAAACTGAGAGGGTTCAGACTCCCAACTATTCACTGTCCAACAAAGGGCAGAAGCAAATTATTTCTGAGGCATCACCAAATCAGTGGCAGAACAAGCAGGCCACTGTACTATCCATGAGGACGCGGACTAAGAAGGTGCAAATGCAAGGTGTTGCTGTTGGTCGTGCGTTTGACTTGACCACGTTGAGTGGCTATGATGATCTCATAGATGAACTTGAGAAATTGTTTGAGATCAGAGGAGAGCTGCGTTCACAAGACAAATGGGCTGTTACTTTCACAGATGATGAAAATGATATGATGCTCGCGGGTGATGATCCATGGCCGGAGTTCTGCAACATGGTGAAGAGGATTTTCATTTGTTCAAGGGAGGACTTGAAGAAGATGAAATGCTGCAAGTTACCTGCTTCTTCATCAGAGGTTGAAGAGATTCTATTGAGTCCAGATTCACAGAATAGGGATGAGACTCAGCAGTCTCACATGCCTTAG 2154 0.429 MAHLECNLGGPGSSGTSQPEKGLKDDDLYRELWKLCAGPLVDVPRNGDRVFYFPQGHMEQLQASTDQELNQEIPHFNLPAKIFCRVVNIQLLAEQDTDEVYACIALLPESDQTEPTNPDPNVSEAPKQKFHSFCKILTASDTSTHGGFSVLRKHATECLPELDMTQSTPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTFVASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVMTRTMFLVYYKPRTSQFIVGLNKYLEAVNNKFSLSMRFKMRFEGDDSPERRFSGTIVGVGDVSAGWSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPFVASTALNVTQPAVKGKRSRPADVLSSAASGFWYHGSSNELSQLGAAAEVQSKENQVVPCSLRQKDIINSNPINANNSSISTRVRMEGVWPSSPHLNATPNLFSDPNNNNSNNGVSARSLISGYPNVPSRSSDGPTCDGVEDGKKTENSLDCWLFGVNLTNNCSNVITTPSEREQRGPSSSVVLSGPKESIPAAACETERVQTPNYSLSNKGQKQIISEASPNQWQNKQATVLSMRTRTKKVQMQGVAVGRAFDLTTLSGYDDLIDELEKLFEIRGELRSQDKWAVTFTDDENDMMLAGDDPWPEFCNMVKRIFICSREDLKKMKCCKLPASSSEVEEILLSPDSQNRDETQQSHMP 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00512 717 Pfam Auxin response factor 259 338 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Gma07g00512 717 SMART B3_2 133 235 IPR003340 GO:0003677
Gma07g00512 717 CDD B3_DNA 131 233 IPR003340 GO:0003677
Gma07g00512 717 Gene3D - 130 234 IPR015300 -
Gma07g00512 717 PANTHER AUXIN RESPONSE FACTOR 11 14 694 - -
Gma07g00512 717 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 14 694 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gma07g00512 717 MobiDBLite consensus disorder prediction 1 23 - -
Gma07g00512 717 MobiDBLite consensus disorder prediction 692 717 - -
Gma07g00512 717 Pfam AUX/IAA family 588 633 IPR033389 -
Gma07g00512 717 ProSiteProfiles B3 DNA-binding domain profile. 133 235 IPR003340 GO:0003677
Gma07g00512 717 MobiDBLite consensus disorder prediction 698 717 - -
Gma07g00512 717 SUPERFAMILY CAD & PB1 domains 601 673 - -
Gma07g00512 717 Pfam B3 DNA binding domain 133 233 IPR003340 GO:0003677
Gma07g00512 717 Gene3D - 593 685 - -
Gma07g00512 717 Gene3D - 294 366 - -
Gma07g00512 717 ProSiteProfiles PB1 domain profile. 597 678 IPR000270 GO:0005515
Gma07g00512 717 SUPERFAMILY DNA-binding pseudobarrel domain 123 262 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00512 Gma-Chr7 4882022 4886303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00512 28 684 B3 DNA Binding Superfamily AT4G23980 54.848 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Gma07g00512 B3 8e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00512 K14486 - gmx:100790981 1426.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00512 07 4882022 4886303 Gma07g00512 07 4882022 4886303 ECH