Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma07g00507 | ATGGGAAGGGCTCCTTGTTGTTCCAAAGTGGGGTTGCACAAAGGTCCATGGACTCCTAAAGAAGATGCATTGCTTACCAAGTATATCCAAGCTCATGGAGAAGGCCAATGGAAATCACTACCCAAAAAAGCAGGGCTTCTTAGATGTGGAAAAAGTTGTAGATTGAGATGGATGAACTATCTGAGACCAGATATAAAGAGAGGGAACATAACACCAGAAGAAGATGATCTTATAATCAGAATGCATTCACTTTTGGGAAACAGATGGTCCCTCATAGCAGGAAGGTTACCAGGGAGAACAGACAATGAAATAAAGAACTATTGGAACACCCATCTAAGCAAAAAGCTGAAAATTCAAGGAACAGAAGACACAGACACACACAACATGTTAGAGAATCCTCAAGAAGAGCCAGCCAGTGATGGTGGCAACAACAACAAAAAGAAGAAGAAGAACGGTGGCAAAAAGAAGAACAAAGGCAAAGACAATGCTGAGCCACCAAAGACCCAAGTTTACCTACCAAAACCAATTAGAGTGAAGGCTATGTATTTACAGAGAACGGATAGTAACACCTTCACCTTTGATTCCAATTCCAATTCTGCTAGTGGATCAACAAGCCAAGAGAAGGATGAAAGCCCCGTGACAAAAGAATCAAACGTGGTTAGTGAAGTTGGTAATGTGGGAGAAGAAAGTGATGGTTTTGGCTTCTTCAGTGAGGACCATGACTTAGTCAACGCCTCAGATATTGAATGCCAATCTTATTTTCCCACATATCATGGCACCCTACAGCAACTGTATGAAGAATATTTTCAGCTCTTGAACATGGATCAAGGCCAATTCGAACGGAATTCCTTTGCAGAATCTTTATTAGAGTGA | 873 | 0.4135 | MGRAPCCSKVGLHKGPWTPKEDALLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKLKIQGTEDTDTHNMLENPQEEPASDGGNNNKKKKKNGGKKKNKGKDNAEPPKTQVYLPKPIRVKAMYLQRTDSNTFTFDSNSNSASGSTSQEKDESPVTKESNVVSEVGNVGEESDGFGFFSEDHDLVNASDIECQSYFPTYHGTLQQLYEEYFQLLNMDQGQFERNSFAESLLE | 290 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma07g00507 | 290 | MobiDBLite | consensus disorder prediction | 125 | 176 | - | - | |
| Gma07g00507 | 290 | SMART | sant | 13 | 63 | IPR001005 | - | |
| Gma07g00507 | 290 | SMART | sant | 66 | 114 | IPR001005 | - | |
| Gma07g00507 | 290 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
| Gma07g00507 | 290 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
| Gma07g00507 | 290 | CDD | SANT | 16 | 61 | IPR001005 | - | |
| Gma07g00507 | 290 | PANTHER | MYB TRANSCRIPTION FACTOR | 1 | 281 | - | - | |
| Gma07g00507 | 290 | PANTHER | TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 | 1 | 281 | - | - | |
| Gma07g00507 | 290 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
| Gma07g00507 | 290 | Pfam | Myb-like DNA-binding domain | 67 | 112 | IPR001005 | - | |
| Gma07g00507 | 290 | MobiDBLite | consensus disorder prediction | 189 | 219 | - | - | |
| Gma07g00507 | 290 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
| Gma07g00507 | 290 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - | |
| Gma07g00507 | 290 | CDD | SANT | 71 | 112 | IPR001005 | - | |
| Gma07g00507 | 290 | Gene3D | - | 14 | 66 | - | - | |
| Gma07g00507 | 290 | MobiDBLite | consensus disorder prediction | 189 | 208 | - | - | |
| Gma07g00507 | 290 | Gene3D | - | 69 | 131 | - | - | |
| Gma07g00507 | 290 | SUPERFAMILY | Homeodomain-like | 11 | 108 | IPR009057 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma07g00507 | Gma-Chr7 | 4790034 | 4791640 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gma07g00507 | 4 | 136 | MYB Transcription Factor Family | AT3G13540 | 66.667 | 5.46e-65 | 202 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | MYB | Gma07g00507 | Myb_DNA-binding | 9.2e-14 | CL0123 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma07g00507 | K09422 | - | gmx:100803345 | 533.102 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma07g00507 | 07 | 4790034 | 4791640 | Gma07g00507 | 07 | 4790034 | 4791640 | ECH | |
| Gma07g00507 | 07 | 4790034 | 4791640 | Gma16g00203 | 16 | 2184881 | 2186262 | GST | |
| Gma19g02425 | 19 | 52735398 | 52737858 | Gma07g00507 | 07 | 4790034 | 4791640 | PCT | |
| Gma03g02379 | 03 | 48911959 | 48914561 | Gma07g00507 | 07 | 4790034 | 4791640 | PCT | |
| Gma07g00507 | 07 | 4790034 | 4791640 | Gma19g02425 | 19 | 52735398 | 52737858 | PCT | |
| Gma07g00507 | 07 | 4790034 | 4791640 | Gma03g02379 | 03 | 48911959 | 48914561 | PCT |