Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00506 ATGCAAATCACGGTTTTGCACAGTTTAGCTCCTTTAGCCAGCATTCATAAAGTAAGCCTACGCATAAAGCCACCCAACAAACGAACCAAAACATTCTTTCTTGCACTAAGGAGCAGTTgcagacaaattgacaagGACAATATTGGACTTATTGTGAGAGTAGTCATGGAGGGGATGGCTCCCAATTCATGTGCAAGGCCAGTTCTAGAGAAAAAAACAAGGCCACAAGAGCAACTGAATTGTCCAAGGTGCAATTCAACCAACACAAAGTTCTGTTATTACAACAACTACAGCCTCACACAGCCAAGATACTTCTGCAAGACTTGTAGAAGGTATTGGACAGAAGGAGGGTCTCTGAGAAACGTTCCAGTTGGAGGTGGTTCAAGAAAGAACAAGAAGGTCTCTGTGACAGCTTCATCATCATCATCACCAAAGGTTCCAGACCTAAACCCACCAATTAACCTCTCATCAGTCTCAGCTATCTCCTCACAAAACCCTAAAATAATGCATGGTGGCCAAGATCTCAACCTGGCTTTCCCAGCTATGGAAAAGTACCATCATGGCATGCCACCTTATGTTGAGATGCAAAACAGTGACACCACCACCACTCATCATCATCACCAAACCTCTTCTTCTTGTTCTGCTCCTCCAGCTTCTCTTTCAGCTCTTGAGCTACTTAGGTCAAGCATGGCATCTAGGGGTTTGAACCCTTATGCTCCTTCTTCTTCCTTGATGCCAAACTCAACAAACAGCAATGCCCTTTACTCATCAGGGTTTCCCATGCAAGAAGTTAAACCTAGTCTTAACTTTTCTTCAGCTGATGGGATGGGAAATAGATCATATGATCATCATCAGATTCAAGAGAGGGGTGGTGGCAGACTTTTGTTCCCTTTTGGAGATGTCAAGCAGCTTTCTGCTGCTGCAGGTGCTGATCAAGTGGAACACAATAAAGAACAACAAGGGAATTCAACTGGTTATTGGACTGGAATGATTGGTGAAGGAACGTGGTAA 1011 0.4313 MQITVLHSLAPLASIHKVSLRIKPPNKRTKTFFLALRSSCRQIDKDNIGLIVRVVMEGMAPNSCARPVLEKKTRPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVSVTASSSSSPKVPDLNPPINLSSVSAISSQNPKIMHGGQDLNLAFPAMEKYHHGMPPYVEMQNSDTTTTHHHHQTSSSCSAPPASLSALELLRSSMASRGLNPYAPSSSLMPNSTNSNALYSSGFPMQEVKPSLNFSSADGMGNRSYDHHQIQERGGGRLLFPFGDVKQLSAAAGADQVEHNKEQQGNSTGYWTGMIGEGTW 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00506 336 ProSiteProfiles Zinc finger Dof-type profile. 79 133 IPR003851 GO:0003677|GO:0006355
Gma07g00506 336 ProSitePatterns Zinc finger Dof-type signature. 81 117 IPR003851 GO:0003677|GO:0006355
Gma07g00506 336 MobiDBLite consensus disorder prediction 120 151 - -
Gma07g00506 336 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 62 331 IPR045174 GO:0003700|GO:0006355
Gma07g00506 336 PANTHER DOF ZINC FINGER PROTEIN DOF3.7 62 331 - -
Gma07g00506 336 MobiDBLite consensus disorder prediction 317 336 - -
Gma07g00506 336 MobiDBLite consensus disorder prediction 132 151 - -
Gma07g00506 336 MobiDBLite consensus disorder prediction 196 217 - -
Gma07g00506 336 Pfam Dof domain, zinc finger 77 133 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00506 Gma-Chr7 4765181 4767879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00506 71 336 C2C2-Dof Transcription Factor Family AT3G61850 48.772 3.38e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma07g00506 zf-Dof 4.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00506 - - gmx:778110 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00506 07 4765181 4767879 Gma07g00506 07 4765181 4767879 ECH
Gma07g00506 07 4765181 4767879 Gma03g02380 03 48931401 48933319 ECH
Gma07g00506 07 4765181 4767879 Gma16g00202 16 2151344 2153631 GST
Gma19g02426 19 52751676 52753714 Gma07g00506 07 4765181 4767879 PCT
Gma03g02380 03 48931401 48933319 Gma07g00506 07 4765181 4767879 PCT
Gma07g00506 07 4765181 4767879 Gma19g02426 19 52751676 52753714 PCT
Gma07g00506 07 4765181 4767879 Gma03g02380 03 48931401 48933319 PCT