Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00500 ATGGAGGAAAAACCATTCCCTGCATGGTCCTGGTCTATTGAACAGTGTTTGAAAGAGTATGGTGTGAAACTGGACAAGGGTCTGAGTACCTATGAGGTTCAGAAGCGGCACGAGAAGTATGGTATGAATGAGCTAGCAAAGGAGAAGGGAAAACCCTTGTGGGAACTTGTGTTGGAACAATTTGATGACATGCTGGTGAAGATACTTTTGGCTGCAGCCTTCATATCATTTCTCTTGGCTTACTTTCACGGAAGTGACTCAGGGGAGTCTGGATTCGAGGCATATGTGGAGCCGCTAGTGATAATTCTAATTTTGGTCCTTAATGCCATTGTTGGGGTTTGGCAAGAGAACAATGCAGAGAAGGCTCTTGAAGCTCTCAAAGAGTTGCAAAGTGAGTCTGGAAAAGTGTTAAGGGACGGCTATTTTGTGCCTGATTTGCCTGCAAAAGAGCTTGTTCCTGGTGATATTGTGGAGCTGCATGTTGGAGATAAGGTACCGGCTGACATGAGAGTTGCGGCTTTGAAAACCTCCACGTTGAGGGTTGAGCAAAGTTCTTTAACCGGAGAAGCAATGCCGGTTCTCAAGGGGACAAATCCTGTTTTCTTGGATGACTGTGAGTTGCAGGCTAAAGAGAACATGGTGTTTGCAGGCACCACTGTTGTCAATGGGAGTTGTGTTTGCATTGTTATCACCACAGGAATGGACACTGAAATTGGAAAGATACATAAGCAGATACATGAGGCTTCTCAGGAGGAGAGTGACACCCCTTTGAGGAAGAAGCTGGATGAGTTTGGTAACAGGCTTACCACTGCAATTGGGTTAGTTTGTCTCATTGTTTGGGTTATTAACTACAAGAATTTCATTTCTTGGGAAGTTGTGGATGGATGGCCCTCAAACATCAATTTTTCATTCCAAAAGTGTACCTACTATTTCAAAATTGCTGTCTCCCTTGCTGTTGCTGCAATTCCTGAAGGCCTTCCTGCTGTTATCACAACCTGTTTAGCACTCGGAACGCGGAAAATGGCTCAAAAGAATGCAATTGTGAGAAAGCTGCCAAGTGTGGAAACTTTGGGATGTACCACTGTTATATGTTCAGACAAAACTGGTACTTTGACAACAAATCAGATGGCTGTGACAGAGTTCTTTACTTTGGGAGGGAAAACCACTGCTTCTAGACTCATTAGTGTTGAAGGCACAACTTATGATCCCAAGGATGGGGGAATTCTTGATTGGGGGTGCTATAACATGGATGCTAATTTGCAAGTCATGGCTGAAATATGTGCTGTATGTAATGATGCTGGGATTTACTTCGATGGTCGCCTTTTTAGAGCCACTGGTTTGCCTACTGAAGCTGCTCTCAAAGTTTTGGTTGAAAAAATGGGAGTTCCAGATGCAAAGGCAAGGAACAAAATTCGCAATAATACAGAACTTGCTGCAAACAACATGATGAATGGCAACACTATGGTGAAGTTAGGATGCTGTGAGTGGTGGAATAAAAGATCCAAAAAGGTAGCTACATTGGAGTTTGATCGAATTCGGAAGTCAATGAGTGTCATTGTTCGTGAACCAAATGGTCAAAATCGGCTTCTTGTCAAGGGTGCTGTTGAGAGTTTACTGGAGCGTAGTTCACATGTGCAACTTGCTGATGGATCCTTGGTTCCAATAGATGATCAATGTAGGGAACTACTTCTTCGAAGACTCCAGGAGATGAGTTCAAAGGGATTGCGTTGCTTGGGTTTCGCTTATAACGATGAATTAGGAGAATTTTCAGACTACTATGCTGACACTCACCCTGCTCACAAGAAATTGCTTGATCCAACATACTACTCATCCATTGAAAGTGATCTAGTTTTTGTTGGCATTGTTGGTTTAAGAGACCCTCCTCGTGAGGAAGTTCACAAAGCAATTGAGGATTGTAAGGAAGCTGGCATTAGAGTTATGGTAATAACTGGAGATAATAAGTCAACAGCAGAGGCTATTTGTAGGGAGATTAAATTGTTCTCTAAAGATGAGGATCTCACAGGGCAAAGTTTGGCTGGTAAGGAATTCATCTCTCTTTCTCATTCAGAACAAGTTAAAATATTGTTGAGGCCTGGAGGCAAGGTTTTCTCTCGAGCTGAGCCTAGACACAAACAAGAAATTGTTAGACTACTGAAGGAAATGGGGGAGATTGTAGCAATGACTGGAGATGGTGTGAATGATGCACCTGCACTTAAGCTAGCCGACATAGGAATTGCTATGGGCATAACTGGGACAGAGGTTGCAAAAGAAGCTTCAGATATGGTGCTAGCAGATGACAATTTTAGTACCATAGTTTTAGCTGTTGCTGAGGGTCGCTCTATTTATAATAACATGAAATCATTTATCAGGTACATGATATCATCCAATATTGGGGAAGTAATATCCATATTCTTGACTGCTGCTCTAGGGATCCCAGAATGCATGATATCAGTGCAACTTCTGTGGGTGAATTTGGTTACTGATGGTCCACCTGCTACAGCTCTTGGTTTTAACCCTGCCGATGTTGATATAATGCAGAAGCCACCTCGCAGAAGTGATGATCCTCTAATAAGTTCTTGGGTTCTTTtccgttatctgGTAATTGGTTCCTATGTGGGACTAGCAACAGTTGGCATTTTTGTCTTGTGGTACACTCAAGCATCTTTTCTTGGCATCAATCTTGTGAGTGATGGTCACACAATCATAGAATTGTCCCAGCTTCGTAACTGGGGGGAGTGTCCCTCATGGTCTAATTTCACTGTTGCTCCATTTGAGGTTGCTGGGGGCCGATTGATCACATTTTCAAATCCTTGTGACTATTTCTCAGTTGGCAAACTAAAGGCCATGACTCTGTCTCTCTCAGTCTTGGTGGCAATTGAGATGTTTAACTCTTTGAATGCCCTCTCAGAAGAGAATAGCTTGAGGAAACTACCACCTTGGAGGAACCCTTGGCTTTTGGTGGCCATGTCAATATCATTTGGACTCCATTGCCTCATACTCTATACCCCATTCCTTGCAGAAGTCTTTGGTGTTATTCCACTTAGTTTGAATGAGTGGTTTATGGTACTTTTGATATCAGCACCTGTTATTCTTATTGATGAGATTCTAAAGTTAGTGGTGAGGAGTCAAAGAAGGTTGTTGACTAAGGAGAAAGAAGCATGA 3162 0.4254 MEEKPFPAWSWSIEQCLKEYGVKLDKGLSTYEVQKRHEKYGMNELAKEKGKPLWELVLEQFDDMLVKILLAAAFISFLLAYFHGSDSGESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALEALKELQSESGKVLRDGYFVPDLPAKELVPGDIVELHVGDKVPADMRVAALKTSTLRVEQSSLTGEAMPVLKGTNPVFLDDCELQAKENMVFAGTTVVNGSCVCIVITTGMDTEIGKIHKQIHEASQEESDTPLRKKLDEFGNRLTTAIGLVCLIVWVINYKNFISWEVVDGWPSNINFSFQKCTYYFKIAVSLAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTEFFTLGGKTTASRLISVEGTTYDPKDGGILDWGCYNMDANLQVMAEICAVCNDAGIYFDGRLFRATGLPTEAALKVLVEKMGVPDAKARNKIRNNTELAANNMMNGNTMVKLGCCEWWNKRSKKVATLEFDRIRKSMSVIVREPNGQNRLLVKGAVESLLERSSHVQLADGSLVPIDDQCRELLLRRLQEMSSKGLRCLGFAYNDELGEFSDYYADTHPAHKKLLDPTYYSSIESDLVFVGIVGLRDPPREEVHKAIEDCKEAGIRVMVITGDNKSTAEAICREIKLFSKDEDLTGQSLAGKEFISLSHSEQVKILLRPGGKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVLAVAEGRSIYNNMKSFIRYMISSNIGEVISIFLTAALGIPECMISVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRRSDDPLISSWVLFRYLVIGSYVGLATVGIFVLWYTQASFLGINLVSDGHTIIELSQLRNWGECPSWSNFTVAPFEVAGGRLITFSNPCDYFSVGKLKAMTLSLSVLVAIEMFNSLNALSEENSLRKLPPWRNPWLLVAMSISFGLHCLILYTPFLAEVFGVIPLSLNEWFMVLLISAPVILIDEILKLVVRSQRRLLTKEKEA 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00500 1053 SFLD C1.7: P-type atpase like 345 780 - -
Gma07g00500 1053 PRINTS Sodium/potassium-transporting ATPase signature 357 378 - -
Gma07g00500 1053 PRINTS Sodium/potassium-transporting ATPase signature 981 1005 - -
Gma07g00500 1053 PRINTS P-type cation-transporting ATPase superfamily signature 182 196 - -
Gma07g00500 1053 PRINTS P-type cation-transporting ATPase superfamily signature 752 764 - -
Gma07g00500 1053 PRINTS P-type cation-transporting ATPase superfamily signature 642 652 - -
Gma07g00500 1053 PRINTS P-type cation-transporting ATPase superfamily signature 364 378 - -
Gma07g00500 1053 PRINTS P-type cation-transporting ATPase superfamily signature 620 631 - -
Gma07g00500 1053 PRINTS P-type cation-transporting ATPase superfamily signature 728 747 - -
Gma07g00500 1053 Pfam Cation transporting ATPase, C-terminus 813 1039 IPR006068 -
Gma07g00500 1053 Pfam E1-E2 ATPase 129 344 - -
Gma07g00500 1053 SUPERFAMILY Calcium ATPase, transmembrane domain M 7 1043 IPR023298 -
Gma07g00500 1053 Gene3D - 361 773 IPR023214 -
Gma07g00500 1053 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 5 1048 - -
Gma07g00500 1053 SUPERFAMILY HAD-like 362 832 IPR036412 -
Gma07g00500 1053 SUPERFAMILY Calcium ATPase, transduction domain A 135 244 IPR008250 -
Gma07g00500 1053 Pfam haloacid dehalogenase-like hydrolase 361 742 - -
Gma07g00500 1053 SFLD p-type atpase 345 780 IPR044492 -
Gma07g00500 1053 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 100 291 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma07g00500 1053 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 701 810 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma07g00500 1053 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 302 389 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma07g00500 1053 Gene3D - 59 1041 - -
Gma07g00500 1053 ProSitePatterns E1-E2 ATPases phosphorylation site. 366 372 IPR018303 -
Gma07g00500 1053 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 371 624 IPR023299 GO:0000166
Gma07g00500 1053 CDD P-type_ATPase_SERCA 9 1041 - -
Gma07g00500 1053 Pfam Cation transporter/ATPase, N-terminus 9 76 IPR004014 -
Gma07g00500 1053 Gene3D - 374 627 IPR023299 GO:0000166
Gma07g00500 1053 Gene3D - 26 248 - -
Gma07g00500 1053 PANTHER CALCIUM-TRANSPORTING ATPASE 5 1048 - -
Gma07g00500 1053 SMART Cation_ATPase_N_a_2 7 81 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00500 Gma-Chr7 4716532 4721989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00500 2 1050 Primary Pumps ATPases(2) AT4G00900 77.683 0.0 1696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00500 K01537 - gmx:100800498 2066.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00500 07 4716532 4721989 Gma07g00500 07 4716532 4721989 ECH
Gma07g00500 07 4716532 4721989 Gma16g00197 16 2097673 2103758 GST