Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00479 ATGGGGAAGAAGGGAAGTGGTAGTTCATGGTTAACTGCTGTCAAAAGGGCATTCAGATCTCCCACCAAAGACAGTGACAAAAGGAGTGGCAGAAGAAGAGAAGACTGTGATCAAGAAGAAGACGAAGAAAAGAAGAGGGAAAAGAGAAGATGGATTTTCAGGAAGACTCACATGAGTCATGAAGGAGGGAACAACAACAACAACACTCAACAAAAGTTGAAGCATGATGTGGCAGCAAGTGGTGGTGGTTCAAGGACAGACCAGGATCAGAAGCATGCAGTTGCGGTGGCGGTGGCCACCGCAGAAGCCGCCATGGCCACCGCTCAGGCGGCGGTGGAGGTGGCAAGGTTGTCCAAACCTGCTAGCCATGCCAGGGAGCATTATGCTGCTGTTGTGATCCAAACTGCTTTTAGAGGGTATCTTGCTAGAAGAGCACTTCGTGCACTAAAGGGTTTGGTGAAGTTGCAAGCTTTGGTTAGGGGTCACAATGTTAGGAAGCAGGCAAAGATGACCCTTAGGTGCATGCAGGCTTTGGTTAGAGTTCAAGCAAGGGTTCTTGACCAACGCATAAGGTCTTCACTTGAAGGTAGTAGAAAATCCACTTTCAGTGACACTGCTAGTGTTTGGGACTCGCGGTATCTTCAGGACATTTCAGATAGGAAATCAATAtcaagagagggaagcagcattacagatgactgggatgaaaggcatcacacagttgaagaagtgaaggccatgttgatgcagaggaaggaagctgctgcaatgaagagggacaagaccttatcccaagccttttcccaacagatttggaggaatggtaggacatcatcaattggaaatgaagatgagttggaagagagaccaaaatggctagatcggtggatggccacaaagccatgggagaatagaggaagggcttcaactgatcaaagagaccacattaagactgtggaaattgacacatctcagccttattcatatctaggaaccaattacagaagatcacatccaaattatcaatacaacccaaACCATCACCAACCACAAAGGCATTCCATTGCTTCCCCACTCCATAGATCTCACCAAAATGGATCCTCCCTTCACCAGTCCCCTGCCACCCCTTCTCCTGCCAAATCGAGGCCCATCCAAGTCCGGTCCGCGAGTCCACGTTGCATTAGAGACGACAGAAGCTACCACACCTCCCAAACACCAAGCTTGAGGTCTAATTACCACTACGCAGGAAATTTGTACCAAAATGGGAGGGTTGTTGGAACTGGAACTAGTAATGGTGGTGCTACTGCTACATTGCCTAATTACATGGCGGCAACCGAGTCTGCAAAGGCTCGAATTCGGTCACAAAGCGCGCCAAGGCAGAGGCCATCCACACCAGAGAGGGACAGGGTTGGATCAGCCAAGAAAAGGCTTTCTTTTCCAGCTCCTGACCCTTATGGTGTGGGAGTGAGTTATGGAAACTATGGACATAGTTTAAGGAGTCCAAGCTTCAAGAGTGTGAGTGGATCACACTTTGGGGGGTTAGAACAACAATCAAATTACTCTTCTTGCTGCACTGAGAGTATTGGTGGGGGTCAGGTTTCTCCTTCTTCAACAGGTGACCTTAGGAGGTGGTTGAGATGA 1641 0.3809 MGKKGSGSSWLTAVKRAFRSPTKDSDKRSGRRREDCDQEEDEEKKREKRRWIFRKTHMSHEGGNNNNNTQQKLKHDVAASGGGSRTDQDQKHAVAVAVATAEAAMATAQAAVEVARLSKPASHAREHYAAVVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSLEGSRKSTFSDTASVWDSRYLQDISDRKSISREGSSITDDWDERHHTVEEVKAMLMQRKEAAAMKRDKTLSQAFSQQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWENRGRASTDQRDHIKTVEIDTSQPYSYLGTNYRRSHPNYQYNPNHHQPQRHSIASPLHRSHQNGSSLHQSPATPSPAKSRPIQVRSASPRCIRDDRSYHTSQTPSLRSNYHYAGNLYQNGRVVGTGTSNGGATATLPNYMAATESAKARIRSQSAPRQRPSTPERDRVGSAKKRLSFPAPDPYGVGVSYGNYGHSLRSPSFKSVSGSHFGGLEQQSNYSSCCTESIGGGQVSPSSTGDLRRWLR 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00479 546 MobiDBLite consensus disorder prediction 303 320 - -
Gma07g00479 546 SMART iq_5 125 147 IPR000048 GO:0005515
Gma07g00479 546 SMART iq_5 148 169 IPR000048 GO:0005515
Gma07g00479 546 PANTHER IQ-DOMAIN 5-RELATED 6 546 - -
Gma07g00479 546 Gene3D - 123 177 - -
Gma07g00479 546 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 6 546 - -
Gma07g00479 546 MobiDBLite consensus disorder prediction 1 48 - -
Gma07g00479 546 MobiDBLite consensus disorder prediction 303 322 - -
Gma07g00479 546 MobiDBLite consensus disorder prediction 327 410 - -
Gma07g00479 546 Pfam Protein of unknown function (DUF4005) 390 494 IPR025064 -
Gma07g00479 546 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Gma07g00479 546 Pfam IQ calmodulin-binding motif 153 169 IPR000048 GO:0005515
Gma07g00479 546 Pfam IQ calmodulin-binding motif 129 147 IPR000048 GO:0005515
Gma07g00479 546 MobiDBLite consensus disorder prediction 19 48 - -
Gma07g00479 546 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Gma07g00479 546 MobiDBLite consensus disorder prediction 447 482 - -
Gma07g00479 546 MobiDBLite consensus disorder prediction 327 384 - -
Gma07g00479 546 MobiDBLite consensus disorder prediction 526 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00479 Gma-Chr7 4444690 4448622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00479 10 546 IQD Protein Family AT4G00820 56.757 1.33e-177 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00479 - - gmx:100786729 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00479 07 4444690 4448622 Gma07g00479 07 4444690 4448622 ECH
Gma07g00479 07 4444690 4448622 Gma16g00174 16 1783079 1785425 GST