Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00477 ATGCCGGAAAACATGAGCATATCAGTGAATGGACAATCTCAAGTCCCTCCTGGCTTCAGGTTTCATCCAACTGAAGAGGAGCTTCTTCAGTACTACTTGAGGAAGAAGGTCTCCTATGAGAAGATTGACCTTGACGTGATTCGTGACGTTGATCTCAACAAGCTCGAGCCATGGGACATACAAGAGAAATGCAAAATAGGAACCACTCCGCAGAATGATTGGTACTTCTTCAGCCACAAAGACAAGAAGTACCCCACAGGAACGCGCACCAATCGCGCCACTGCTGCAGGGTTCTGGAAGGCCACTGGCCGTGACAAAGTCATATACAGCAACGGCAAGAGGATTGGAATGAGAAAGACTCTGGTTTTCTACAAAGGAAGAGCCCCACATGGCCAGAAATCCGATTGGATCATGCATGAATACAGACTAGACGACAACAACACCGCTGACACCAATATTGTGTCCAATGTGATGGGGGATGCTGCTCAGGAAGAAGGGTGGGTGGTGTGTAGGATATTCAAGAAGAAGAACCATCTGAAAACCCTAGACAGCCCCTTGGCTTCAGGGGAAGATAGAAGGAGCCACTTGTTCGACTCGTGCGACGAGGGAGCTTTGGAGCAAATACTTGAGCAAATGGGAAGGAGTTGCAAGGAAGAGAGCAGCTATGAAGGCAACTACAGAAACTATGGAAGGTTTACAAGGCCTTATGAGACAACAGGGTTGAACAATGGCGGCGGATACAATGATAGGTTCATGAAGCTCCCGAGCCTCGAGAGCCCGAAATCCGCGAGCATGGAGAGCCACCACAACACCaacaacaacaataacatgaatagtaataataataataatggtgataacaacgagaacaacaataataatgggtaccatcccatgattccagtagagatgggcACAGACAACGAAGGGTCATTCACAACGCACCAGGTGAGTGGTGGTGACCCCAACAACAACAACAACAACATGGTTCATCCATTGGAGGTAGGATCAGGTGGTGGAGGCCTCACCAACTGGGCTGCGCTGGACCGTCTAGTTGCATCTCAACTCAATGGCCAAACCGATGCCTCTAGGCAACTCGCGTGTGCATTCAACGACCCCACCATGTATTGCACCAGTGACCATCATGATCTTCATCAAATCCCCACCCTCCGATCCTCATCAACGTCCGCGGCGCACACTTGA 1203 0.4605 MPENMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNNTADTNIVSNVMGDAAQEEGWVVCRIFKKKNHLKTLDSPLASGEDRRSHLFDSCDEGALEQILEQMGRSCKEESSYEGNYRNYGRFTRPYETTGLNNGGGYNDRFMKLPSLESPKSASMESHHNTNNNNNMNSNNNNNGDNNENNNNNGYHPMIPVEMGTDNEGSFTTHQVSGGDPNNNNNNMVHPLEVGSGGGGLTNWAALDRLVASQLNGQTDASRQLACAFNDPTMYCTSDHHDLHQIPTLRSSSTSAAHT 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00477 400 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
Gma07g00477 400 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 385 - -
Gma07g00477 400 MobiDBLite consensus disorder prediction 260 297 - -
Gma07g00477 400 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 8 385 - -
Gma07g00477 400 MobiDBLite consensus disorder prediction 259 298 - -
Gma07g00477 400 ProSiteProfiles NAC domain profile. 15 175 IPR003441 GO:0003677|GO:0006355
Gma07g00477 400 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Gma07g00477 400 SUPERFAMILY NAC domain 9 175 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00477 Gma-Chr7 4398672 4401245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00477 1 392 NAC Transcription Factor Family AT2G46770 53.827 4.83e-132 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma07g00477 NAM 3.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00477 - - gmx:100784623 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00477 07 4398672 4401245 Gma07g00477 07 4398672 4401245 ECH
Gma07g00477 07 4398672 4401245 Gma16g00172 16 1745295 1747387 GST