Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00465 ATGGATGAGTTGAACGGCGCCATGACGACGGAGAATAGCAATGCGGAGGTGGTTCGATGGGAGAGGTTTCTGCCGCGGATGGTGCTCAGAGTGCTGCTTGTAGAAGCTGATCATTCCACGCGCCAAATCATCGCCGCGCTTCTTCGCAAATGCAGTTACACAGTTATTGCGGTTCCGGATGGATTAAAGGCATGGGAAACGTTGAAGAAGAAGGCACCTGAGCTAGATCTCATATTAACAGAAGTGGAGCTACCAGCAATATCTGGATTTGCACTTCTTTCTTTGATCATGGAGCATGACATTTGTAAAAACATTCCAGTCATAATGATGTCTTCTCATGATTCGGTTAGCATGGCATTGAAATGCATGTTAAAAGGGGCAGTTGATTTTCTTATAAAACCCATTCGGAAGAATGAGCTTAGGAACTTGTGGCAACATGTATGGAGAAGGCACGCTATTAGCACTCCTACTCAAAATACAACCTTTTCACCGAAAAAACTTAAAACTGCCTCAGAAGACAATTCTGCAAGCAATAAATCTAGTGGTTCTGTGGCTTCCTCAAAGAAAAACAACGAATGCAGCGAGAGATTAAGTGAGGCTCAAgatgtgccccagtatgtacattgccaagttatgcaaactcttgtgcagagcacttgtacatcccctatttttgaagccaagagtacatatgtggaaaatatgcaggatgtgccccCGCTGAAAAGTTCTAAACTGAACAAAATTGATATGGTGAAGCATGAAAAGTTTGCCCAATTTGAAAGGGAATCAGCTGAGCATAATGATGAAACAGAAGATAAATCAGTTACAATTGTATCAGATGCTGCAAGGTGCGACAAAACTTCTGAATTAACAGAGTTAAGGCCAGAACAAGACTGTGGTGTTGCTGAACCTGAAACTGAAAACGAGGATGAAATCTTAAAATCTGAGTTAGACGGAGACAATTCTCATGTTAGTATGATGCAAGGATGCAGTGCTGAGCGGGTGAAACCTTCTAAAGGAGCTATTGACTTGATTGCCACAGTTGGAAATCTTCCAAAGCACCTTGATGAAAACTGTAGTCTCAATGGTGGTAATACAACCAAGTTTGATTGTGAAACGCAATTGGAACTTTCCTTAAGAAGTGATTTTCCTGGCAGCTCAGGTAATCAAGCAAGTGAAGCAACTGAGGAATCTCAAAGATTGAACCATTCAAATACTTCTGCCTTTTCTTGGTATAGTAATAGTAAATTGTTGCAGCCTCATTTTTCAACACCATCGATTACATTTCCTGAAGTAAACAACCTCAGTTGGGATTCTCATGAATCCCATAAATTATCTGGAATTACTTCTGGAAATTGTCAGTATGGTGGCTCAAATCAGAACCTGGAGAATATGATCGGTACAGTCATTTGTCAGTATGGACAAGTTACACCAAAATTATCAAACAGTCAATGTGGACTCTTACCTGTTTCTGGGGTTATCTCCAACCTTAAGTCTGAGGGACATGGTAATGTTTTCACTTCTTTGTTCTATGCACAATCTGGTATTCACCCTATGTCGAGTCCAAAACCTGTCTGCCAGAATGAGAGTTCTCCCTTTCCCACAAGTACCTCCACCCAGTCCTATCCTGAAAGCCACAACTCAGATCAACTACATGACTGCTCCAATGATGCTACTTGTCTTAATCAAAATGTAAAGGATAATACTGATTCAGATCACGCAAGGCATGATTCTCCTGTTGCTGATCAGAGTGCTGGTAATAGTTTATGCCATGATGCTGCAAATCATGTCAATAGTAGTGCATATGGAAGCATGGACAGTGGAAATGATGGAAATGCTACTTCAGCTATAGTATCCAAGAACGCCCCAGATGGTTTCAGTGATAGTGGTTGTCATAATTATGATGGATTTAGAGTGACAGATCCTCATCGCTCCAGTCAAAGAGAAGCAGTGCTAGTGAAGTTTCGACTGAAGCGGAAAGAGAGATGCTTCGAGAAAAAGGTTCGATATCAAAGCCGGAAAAGACTGGCAGAGCAGCGGCCTCGGGTGAAGGGGCAGTTTGTACGTCAACATGATCATCCTGTCGCTGAGGCTGGTGGTGATTCATGA 2112 0.3973 MDELNGAMTTENSNAEVVRWERFLPRMVLRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKKAPELDLILTEVELPAISGFALLSLIMEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELRNLWQHVWRRHAISTPTQNTTFSPKKLKTASEDNSASNKSSGSVASSKKNNECSERLSEAQDVPQYVHCQVMQTLVQSTCTSPIFEAKSTYVENMQDVPPLKSSKLNKIDMVKHEKFAQFERESAEHNDETEDKSVTIVSDAARCDKTSELTELRPEQDCGVAEPETENEDEILKSELDGDNSHVSMMQGCSAERVKPSKGAIDLIATVGNLPKHLDENCSLNGGNTTKFDCETQLELSLRSDFPGSSGNQASEATEESQRLNHSNTSAFSWYSNSKLLQPHFSTPSITFPEVNNLSWDSHESHKLSGITSGNCQYGGSNQNLENMIGTVICQYGQVTPKLSNSQCGLLPVSGVISNLKSEGHGNVFTSLFYAQSGIHPMSSPKPVCQNESSPFPTSTSTQSYPESHNSDQLHDCSNDATCLNQNVKDNTDSDHARHDSPVADQSAGNSLCHDAANHVNSSAYGSMDSGNDGNATSAIVSKNAPDGFSDSGCHNYDGFRVTDPHRSSQREAVLVKFRLKRKERCFEKKVRYQSRKRLAEQRPRVKGQFVRQHDHPVAEAGGDS 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00465 703 ProSiteProfiles Response regulatory domain profile. 30 148 IPR001789 GO:0000160
Gma07g00465 703 Pfam Response regulator receiver domain 31 142 IPR001789 GO:0000160
Gma07g00465 703 Pfam CCT motif 649 691 IPR010402 GO:0005515
Gma07g00465 703 Gene3D - 27 229 - -
Gma07g00465 703 SUPERFAMILY CheY-like 29 156 IPR011006 -
Gma07g00465 703 MobiDBLite consensus disorder prediction 158 191 - -
Gma07g00465 703 MobiDBLite consensus disorder prediction 158 196 - -
Gma07g00465 703 MobiDBLite consensus disorder prediction 521 592 - -
Gma07g00465 703 PANTHER PRR RESPONSE REGULATOR 7 700 - -
Gma07g00465 703 MobiDBLite consensus disorder prediction 676 703 - -
Gma07g00465 703 SMART REC_2 29 144 IPR001789 GO:0000160
Gma07g00465 703 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 700 IPR045279 GO:0009736
Gma07g00465 703 CDD psREC_PRR 31 134 - -
Gma07g00465 703 MobiDBLite consensus disorder prediction 381 403 - -
Gma07g00465 703 MobiDBLite consensus disorder prediction 521 568 - -
Gma07g00465 703 ProSiteProfiles CCT domain profile. 649 691 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00465 Gma-Chr7 4276273 4281521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00465 612 691 Response Regulator Gene Family AT5G24470 56.250 2.61e-19 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Gma07g00465 Response_reg 1.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00465 K12130 - gmx:100791698 1387.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00465 07 4276273 4281521 Gma07g00465 07 4276273 4281521 ECH
Gma07g00465 07 4276273 4281521 Gma03g02403 03 49099161 49103468 ECH
Gma07g00465 07 4276273 4281521 Gma16g00158 16 1620919 1625607 GST