Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00463 ATGGAAAGGCTCCAAGGACCCCTCAATTCCTGTTTCTTTGGAGACCCTTTGGAAGTGAATTGTTTGGACCAAGTTCTGGTGGATGAAGAAAGCCTGAGACTAGAAGAGGAAGAGCAGTTTCTGATATCAAGCTTAGAGGACAACATGCCGTTCCTTCAGATGCTTCAGAGTGTGGAATCCCCACAGTTTTTCCCTTTGAAAGAGCCAAACTTTCAAACACTTCTGAGGCTGCAGCACATGAAGAAGCCATGGGAGGGAATAGCCTACATTCCAAGAATGGAAGCACAAGTGCAAGCAGCATTGGAGCTAGAGAGTTGTGTGACACATGACATGTTGGAGATGCAGTCACCAGTGAAGTCAGAAAGCAATGAACTCCAACACCCACTTTCAATTTCATGTTTTGAGAAAGTGAACTATGAGTGCAACCAGGAACCACAGAAAGTTTCACAAACATGCCCCAAATCTCAGCCAGCAGCAACAAGGGAAAGGAGAAAGAGAAAGAGAACAAGGCCAAGCAAGAACAAGGAAGATGTGGAGAACCAACGCATGACCCACATTGCTGTTGAACGCAACCGGCGACGCCAAATGAATGACCACCTCAGTGTCCTTAGATCCCTCATGCCACCTTCATATATTCAAAGGGGTGACCAAGCCTCAATAATTGGGGGAGCAATAGATTTTGTGAAGGAGTTGGAGCAGTTGCTTCAGTCCCTTGAGGCACAAAAAAGGATGAGAAAGAATGAAGAGGGTGGTGGTGGTTCTTCTTCTTCCACCATGTTGTGTAAGCCCCCACCACCATCGTCATTATCATCACCACATGGCTATGGAATGAGGTCATCAACTAGTGATGAAGTGAACTGTGGGGATGAAGTGAAGGCAGAAAACAAGTCAGAGGCAGCAGACATAAAAGTGACCTTGATTCAAACCCATGTGAACTTGAAAATTGAGTGCCAAAGGAGGCCAGGACAATTGTTAAAGGTCATTGTTGCTTTGGAGGACCTTAGGCTAACCATTCTGCACCTCAACATCACCTCCTCAGAGACTTCTGTCCTTTACTCCCTCAATCTCAAGATTGAAGAAGATTGTAAGCTATGTTCAGCAAGTGACATTGCAGAAGCAGTTCATCAAATATTCAGCTTCATTAATGGTAGCTAG 1155 0.4519 MERLQGPLNSCFFGDPLEVNCLDQVLVDEESLRLEEEEQFLISSLEDNMPFLQMLQSVESPQFFPLKEPNFQTLLRLQHMKKPWEGIAYIPRMEAQVQAALELESCVTHDMLEMQSPVKSESNELQHPLSISCFEKVNYECNQEPQKVSQTCPKSQPAATRERRKRKRTRPSKNKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLLQSLEAQKRMRKNEEGGGGSSSSTMLCKPPPPSSLSSPHGYGMRSSTSDEVNCGDEVKAENKSEAADIKVTLIQTHVNLKIECQRRPGQLLKVIVALEDLRLTILHLNITSSETSVLYSLNLKIEEDCKLCSASDIAEAVHQIFSFINGS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00463 384 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 180 247 IPR036638 GO:0046983
Gma07g00463 384 MobiDBLite consensus disorder prediction 145 181 - -
Gma07g00463 384 Coils Coil 228 248 - -
Gma07g00463 384 MobiDBLite consensus disorder prediction 243 285 - -
Gma07g00463 384 SMART finulus 186 237 IPR011598 GO:0046983
Gma07g00463 384 MobiDBLite consensus disorder prediction 250 264 - -
Gma07g00463 384 Pfam Helix-loop-helix DNA-binding domain 181 232 IPR011598 GO:0046983
Gma07g00463 384 Gene3D - 171 251 IPR036638 GO:0046983
Gma07g00463 384 CDD bHLH_AtFAMA_like 183 249 - -
Gma07g00463 384 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 180 231 IPR011598 GO:0046983
Gma07g00463 384 PANTHER TRANSCRIPTION FACTOR BHLH70 19 383 - -
Gma07g00463 384 PANTHER MAX DIMERIZATION, MAD 19 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00463 Gma-Chr7 4251989 4254262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00463 43 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 44.286 6.42e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma07g00463 HLH 3.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00463 - - gmx:100789928 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00463 07 4251989 4254262 Gma07g00463 07 4251989 4254262 ECH
Gma07g00463 07 4251989 4254262 Gma16g00155 16 1595301 1598435 GST