Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00454 ATGGAGTTGGGTGGACCCAGAGTGATCGGGGATTACATAGTGGGTCCTCGAATCGGGTCGGGTTCGTTCGCGGTGGTGTGGCGTGCAAGGAATCGAAGTTCGGGTTTGGAGTATGCGGTTAAGGAGATTGATAAGAGACACTTGAGTCCCAAAGTGAGGGAAAATCTTCTCAAAGAGATTTCTATCCTTAGCACCATCCATCACCCCAACATCATTCGACTCTTCGAGGCAATTCAGACCAATGACAGGATTTACCTTGTTTTGGAGTATTGTGCTGGTGGGGACCTTGCTGCTTACATTCATCGCCATGGCAAAGTTTCTGAACCGGTTGCACACCATTTCATGAGGCAATTGGCTGCTGGGTTGCAGGTGCTTCAAGAAAAGAACCTCATCCATAGAGATTTAAAACCACAGAATTTACTGTTGGCAACTACTGCAGCTACACCAGTTATGAAAATAGGGGATTTTGGTTTTGCAAGGTCTCTTACACCCCAGGGATTGGCTGATACGCTATGTGGTTCACCCTATTACATGGCTCCAGAGATAATTGAAAATCAGAAGTATGATGCCAAGGCTGATTTATGGAGTGTTGGGGCAATATTGTATCAACTAGTGATTGGGAGGCCACCATTTGACGGAAATAGTCAATTGCAGCTTTTTCAAAATATTTTGGCATCTACTGAACTGCACTTTCCACCAGATGCATTAAAAGTGCTACACTCTGATTGCTTGGATCTTTGCAGAAATCTTTTACGTCGAAACCCAGATGAGAGATTAACATTCAAGGCATTCTTCAATCACAATTTCCTACGGGAACCCAGAAAGGATGGCAAGATTACAGCTGGTACTACGAATGCTAAAGGTAAAGGGTCAACTCCAACTATTGCAAGTGATAAGCTGGGGAAGGCTGTTGATGCTGTTTCCCATTTAATGGAGTCCATCGAGAAAGATTATGTCTTTGTCAATTCCCATTTCGCATCATTGGAGGCTTTCTCTGACTACTTTGAAGCATCTGTGCAAGATAGTTCCTCGCACAGGATTTCTCTGTTTCCTTCAAAGAGGACTAATATGGAGGTTAGAGATGCAAAACAAACAAAGGATCTGCCCTCTTCCTCCACTGAAGGATTAGAAAATTTAAAAAGCAATAAACTTGAGGCATGTGCAGCTTCCTGTGAATTTGCTGCCTTAAGGAAAGAACATCAAATTTCCCCACTGCACCCTTCAAACAGGTTACAGTTGTTGCATCAGTATGTGCAGATCATTGCTGAACTTTCACAAGAAAAGTATAACACAGGACTGTATCTAGAGTCTCTTGCAGTTGAGTTGGTGGTTTTGGCTATATGGAAACAGACTCTAGAAATTTGTAGCTCTTGGATGGCCTCAATTACAAAGAGTGAGTTGCCTGGAAGCAGTTCAGCTAATGAATCCATATCTGCCAGAGATATTAACTTGCCACAGTCTACAGAACAGAAAATAAATTTTAGTGATCCTTCATCTATCTCCCTGTGGGCCAAACATGAGTTTATTGATGCAGTTGATCGTGCTGAGAAACTATCATGTCATGTTCAAAATATGGATAAGGCAACTGAGATGCCAGATGCAATGGAAATTATATTCCAAAAAGCTCTCTTAATTGGGACAAGTGGTGCTGTAGATGAATATATGGAGATCAGAGATAGGGCTGCTGCATCTTACTCAAAAGCGATGCTTCTACTTTCATTTATTGTGGCAGAAGCAGAGAACCTTCCACTGAACCCACCATTTTCACTTGTTGCCACTAATAAGGAGCGAATCTCACAATATATTCACAGCTTGCAGTCTCGTAAAGAATCTTCATCAGAGTCCTCTTCAAAGAAAGTGCTTATACTTTTATCAAAACGAGAGACTACCTTTGACAGATACCATGTTGTATATAGATAG 1920 0.4198 MELGGPRVIGDYIVGPRIGSGSFAVVWRARNRSSGLEYAVKEIDKRHLSPKVRENLLKEISILSTIHHPNIIRLFEAIQTNDRIYLVLEYCAGGDLAAYIHRHGKVSEPVAHHFMRQLAAGLQVLQEKNLIHRDLKPQNLLLATTAATPVMKIGDFGFARSLTPQGLADTLCGSPYYMAPEIIENQKYDAKADLWSVGAILYQLVIGRPPFDGNSQLQLFQNILASTELHFPPDALKVLHSDCLDLCRNLLRRNPDERLTFKAFFNHNFLREPRKDGKITAGTTNAKGKGSTPTIASDKLGKAVDAVSHLMESIEKDYVFVNSHFASLEAFSDYFEASVQDSSSHRISLFPSKRTNMEVRDAKQTKDLPSSSTEGLENLKSNKLEACAASCEFAALRKEHQISPLHPSNRLQLLHQYVQIIAELSQEKYNTGLYLESLAVELVVLAIWKQTLEICSSWMASITKSELPGSSSANESISARDINLPQSTEQKINFSDPSSISLWAKHEFIDAVDRAEKLSCHVQNMDKATEMPDAMEIIFQKALLIGTSGAVDEYMEIRDRAAASYSKAMLLLSFIVAEAENLPLNPPFSLVATNKERISQYIHSLQSRKESSSESSSKKVLILLSKRETTFDRYHVVYR 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00454 639 Pfam Protein kinase domain 14 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00454 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Gma07g00454 639 PANTHER BNAC06G18300D PROTEIN 7 601 - -
Gma07g00454 639 SMART serkin_6 12 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00454 639 CDD STKc_ATG1_ULK_like 18 269 - -
Gma07g00454 639 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 7 601 IPR045269 GO:0004674|GO:0006914
Gma07g00454 639 SUPERFAMILY Protein kinase-like (PK-like) 8 271 IPR011009 -
Gma07g00454 639 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Gma07g00454 639 ProSiteProfiles Protein kinase domain profile. 12 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00454 639 Gene3D Transferase(Phosphotransferase) domain 1 6 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00454 Gma-Chr7 4179666 4184915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00454 8 260 CBL-interacting serine-threonine protein kinases AT2G30360 35.521 4.32e-49 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Gma07g00454 Pkinase 2.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00454 - K08269 gmx:100779262 1167.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00454 07 4179666 4184915 Gma07g00454 07 4179666 4184915 ECH
Gma07g00454 07 4179666 4184915 Gma16g00151 16 1537178 1542656 GST