Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00441 ATGACGATGATGAGCAGCAACAACAACAACAACGTTGGAGAATTTGGAGACACCACTCTGACTAAGGTTTTTGTTGGGGGCTTAGCTTGGGAGACTCCGAAGGATGCCCTCAAAGACCACTTTGAGAAGTATGGTGAGATCCTTGAAGCTGTCATCATTTCCGATAAGCACACTGCCAAATCCAAAGGCTATGGCTTTGTGACTTTCAAGGAGGCTGAGGCTGCCAAGAAGGCTTGTGAGGATTCAGCAACTCTCGTTATCAATGGCCGTCGAGCAAATTGCAATCTTGCTTGCCTAGGTGCTCGTCGCCCAAGGTCTTCTTCCAATGTTTCACCACCTCCACAACCACAAGGAGGATCAAACGGTGGAGTAGTGAAGAACAATGCATCAAGCCCACCAGCCATTAATCACGTGCAGCCATATTATTATCCAGTGAGGACAACTGCTGCTCTGCCATTCCATAATCACACTCTTCCTTTCTATGGGTATGCGCCTACCTACATTGTGACGGACGTAAACTACAATTACAATCAGAAACTGTGCTATGGTAGCGGTGGGACCTACATGAATGGGCAGCATGTGTACCCGAGGCAGGCTATTGTGGGTGCCAACACACTGATGCCAATGTACCCTCTTTATCAGTATCATCATCCAACGGAGACCATAGGTGTACCAGCTCACAACTTTTATCCAACGGCATCATGGGCCCCAATGACCATCATGTCCAAGCCATCGTCTATCGTTCCTCATACAGGTACAGTTGGCACAGGTGAGTGCTTTAAAAGGGTTGTCTGA 795 0.4792 MTMMSSNNNNNVGEFGDTTLTKVFVGGLAWETPKDALKDHFEKYGEILEAVIISDKHTAKSKGYGFVTFKEAEAAKKACEDSATLVINGRRANCNLACLGARRPRSSSNVSPPPQPQGGSNGGVVKNNASSPPAINHVQPYYYPVRTTAALPFHNHTLPFYGYAPTYIVTDVNYNYNQKLCYGSGGTYMNGQHVYPRQAIVGANTLMPMYPLYQYHHPTETIGVPAHNFYPTASWAPMTIMSKPSSIVPHTGTVGTGECFKRVV 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00441 264 Gene3D - 3 111 IPR012677 -
Gma07g00441 264 MobiDBLite consensus disorder prediction 103 130 - -
Gma07g00441 264 PANTHER GEO13361P1-RELATED 1 251 - -
Gma07g00441 264 CDD RRM_RBM24_RBM38_like 21 97 - -
Gma07g00441 264 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 23 90 IPR000504 GO:0003723
Gma07g00441 264 PANTHER RNA-BINDING PROTEIN ARP1-RELATED 1 251 - -
Gma07g00441 264 SUPERFAMILY RNA-binding domain, RBD 17 121 IPR035979 GO:0003676
Gma07g00441 264 SMART rrm1_1 22 95 IPR000504 GO:0003723
Gma07g00441 264 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 21 99 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00441 Gma-Chr7 4009209 4011857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00441 17 167 C2H2 Transcription Factor Family AT2G19380 29.487 1.27e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00441 - - gmx:100780861 500.36