Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00439 ATGGCGATTGAACACGAAGACGATCTCAAAGACGAGAAGAACCCTCGACCTCTCGACGAGGATGACATCGCCCTCCTCAAGACCTACGGTTTGGGACCTTACTCCACAAGCATAAAAAAGGCGGAGAAGGAAATCAAAGATATGGCCAAGAAAGTGAATGACTTATGTGGTATAAAGGAGTCTGATACTGGTTTAGCTGCACCAAGCCAGTGGGATCTTGTTTCTGATAAGCAAATGATGCAGGAGGAGCAGCCTCTTCAGGTGGCAAGGTGCACAAAGATTATAAACCCAAATTCTGAAGATGCCAAGTATGTTATCAATGTGAAGCAGATTGCAAAGTTTGTTGTTGGGCTAGGAGACAAGGTTTCCCCCACTGACATAGAGGAAGGGATGCGTGTTGGGGTTGATAGAAATAAATATCAGATTCAGATTCCTTTGCCTCCAAAAATTGATCCAAGTGTGACCATGATGACTGTTGAAGAGAAGCCAGATGTAACATATAATGATGTTGGCGGTTGTAAGGAGCAGATTGAAAAGATGCGAGAAGTTGTTGAACTTCCCATGCTTCATCCAGAGAAATTTGTCAAGCTTGGGATTGATCCTCCAAAGGGTGTTCTTTGTTATGGCCCCCCAGGAACTGGGAAAACACTTTTAGCCAGGGCTGTGGCTAATAGGACTGATGCTTGTTTTATAAGGGTTATTGGAAGTGAGCTAGTTCAGAAATATGTTGGTGAGGGGGCTAGGATGGTTCGTGAACTATTTCAGATGGCTCGTTCAAAGAAGGCATGCATTGTGTTTTTTGATGAAGTTGATGCAATTGGAGGTGCACGATTTGATGATGGCGTTGGTGGTGACAATGAGGTTCAGCGCACCATGCTTGAAATTGTGAATCAGCTTGATGGGTTTGATGCTCGGGGAAACATCAAAGTTTTGATGGCAACTAATAGTGCTGCTAACCTGGGCTTATGGTCATGTCTTTTTGTCAACAATTTCTAG 996 0.4388 MAIEHEDDLKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNSAANLGLWSCLFVNNF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00439 331 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 5 318 - -
Gma07g00439 331 CDD AAA 171 315 - -
Gma07g00439 331 Gene3D - 32 157 IPR012340 -
Gma07g00439 331 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 317 IPR027417 -
Gma07g00439 331 Pfam ATPase family associated with various cellular activities (AAA) 205 318 IPR003959 GO:0005524|GO:0016887
Gma07g00439 331 Gene3D - 158 321 IPR027417 -
Gma07g00439 331 SMART AAA_5 201 331 IPR003593 -
Gma07g00439 331 Coils Coil 38 58 - -
Gma07g00439 331 PANTHER 26S PROTEASE REGULATORY SUBUNIT 7 HOMOLOG A 5 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00439 Gma-Chr7 3983821 3987504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00439 165 317 Miscellaneous Gene Families AT3G47060 44.872 3.65e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00439 K03061 - gmx:100779787 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00439 07 3983821 3987504 Gma07g00439 07 3983821 3987504 ECH
Gma07g00439 07 3983821 3987504 Gma16g00139 16 1369288 1372840 GST