Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00436 ATGAGTGCAAGTGACAACGCATGGGGTGAATCTGACACAATTGAGATCACAGGAAAGATCATGGTGGTGGCCATAATATTCCTCTTCATGGTGGTTGTCTTTGTTCTTGTGCTCCATCTCTATGCAAAATGGTTCTGGTGGAGCATGGAGGAAAACGCCACTCCCCAGCCCCGCCACCGCCGCCGCCGCCGCCGGAGGTTTGTCTTCGCCCCCGGTCAAGACTCGGTGATCTATGAGACTCACCAGGTTGGGCTTGACCCTTCAGTTCTCAAGTCCTTGCCAGTGTTGGTTTTCCAACCTGAGGACTTCAAAGAAGGTTTGGAGTGTGCAGTTTGCCTCTCTGAGATTGTCCAAGGTGAAAAGTTGAGGCTTTTGCCCAAATGCAATCATGGGTTTCATGTGGATTGCATTGACATGTGGTTCCATTCACACTCCACTTGTCCTCTTTGTAGGAACCCTGTTGCTTTTGAATCCTCTAAATGTGAAGAGAGTAATGTCTCAGGGAATAGTGATTCATCATCATCATCATATGAAGAGAACTCAGGTGGTGTGAGTGGTTTGGAACCTTCAAATTTTCCCACAAATGTGTTGGTTTGGGGGAACCAGACACAAGTTAGTTCCATTGGGGTTTCATTGGAAGAAAAAGAAGAAGAAGAAGAAGAAGGTACTTCTCAGTCCCAGCAACCACCTTGTTCTACACCACCTACAGCATCTTCTTCTGCTAGTAGCAATGTTAATGGAAGGTGTCATGGAATGTTGGTGATTGATATTCCAAGTGAGTGCACTTCCTCCTCTTTGTCACCTTCTGGGAGTAGGTGTGCTGAAGAGGAGGTGAAATCACCAATGGCTGCCACATTGAGGTCATTCAAGAGGCTTTTGAGCAGGGACAAAAAGTTGAGTCCTTGCAGTCCAAGTTCTGTAGACGTGGAACAAGCACAGAGCTAG 945 0.4709 MSASDNAWGESDTIEITGKIMVVAIIFLFMVVVFVLVLHLYAKWFWWSMEENATPQPRHRRRRRRRFVFAPGQDSVIYETHQVGLDPSVLKSLPVLVFQPEDFKEGLECAVCLSEIVQGEKLRLLPKCNHGFHVDCIDMWFHSHSTCPLCRNPVAFESSKCEESNVSGNSDSSSSSYEENSGGVSGLEPSNFPTNVLVWGNQTQVSSIGVSLEEKEEEEEEGTSQSQQPPCSTPPTASSSASSNVNGRCHGMLVIDIPSECTSSSLSPSGSRCAEEEVKSPMAATLRSFKRLLSRDKKLSPCSPSSVDVEQAQS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00436 314 Pfam Ring finger domain 108 151 IPR001841 -
Gma07g00436 314 SUPERFAMILY RING/U-box 89 157 - -
Gma07g00436 314 PANTHER RING-H2 FINGER PROTEIN ATL3 3 311 - -
Gma07g00436 314 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Gma07g00436 314 MobiDBLite consensus disorder prediction 260 281 - -
Gma07g00436 314 MobiDBLite consensus disorder prediction 208 245 - -
Gma07g00436 314 MobiDBLite consensus disorder prediction 224 245 - -
Gma07g00436 314 CDD RING-H2_EL5_like 108 151 - -
Gma07g00436 314 MobiDBLite consensus disorder prediction 162 186 - -
Gma07g00436 314 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 3 311 IPR044675 -
Gma07g00436 314 SMART ring_2 109 150 IPR001841 -
Gma07g00436 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 160 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00436 Gma-Chr7 3963389 3964559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00436 15 297 C3H Transcription Factor Family AT1G53820 42.345 3.36e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00436 - - gmx:100775523 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00436 07 3963389 3964559 Gma07g00436 07 3963389 3964559 ECH
Gma07g00436 07 3963389 3964559 Gma16g00130 16 1285693 1286893 GST