Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00422 ATGTTTCCGTTTCATTCTCAAGGAGCTCCGAAATACACTTGCACTCTTCTCGCTGTGACCTGTGGCACAAGTTCCGCTGAGCACAAACTCTCACATGCTGAGCGCACATATCCTTTCCCTGAGTTCGTTTCCGCGGGGCGTCTTGAGGTTCAAACTCTTCGCAGTCCGGAGAAGGAACAGTTTCGGAAAGTTCTGGAGTCGTATCAACCGAATTTTGTTTACTTGCAAGGAGAACAGTTAGAGAATGGGGAAGTAGGTCCACTGGTTTGGCAGGGAGTGGAATTATCCACTTGTGAAGATACAACAGAGCTCTTTGGTTCCACATTGCCGACGGCTGTTTATTTAGAAATACCAAATGGAGAAAGTTTTGCAGAGGCTCTTCATCTTAAGGGAATCCCATATGTTATATTTTGGAAGAATGCCTTTTCTTGTTATGCTGCCTGCCATTTTCTTCAAGCATTTCTTTCAGTAGTACAAAGTTCATCTACACATACATGGGATGCTTTCCACCTTGCACGTGCCTCTTTTGAACTTTACTGTGTCCAAAACAATCAAGTACTTCCTTCTGATAGCGATGATGCTAATAGTGAGATGGGGCCACACCTTCTTGGCGACCGTCTCAAAATCAATGTTGACCCTCCAGAGATCGATGAAGAGGATGATGATGAAAGTTCCCCAGGCAGTTTGCCTGCCATAAAGATACATGAGGATGAAGTGAACTTGAGATTTCTCATCTGTGGTGCACCTTCGACTGTTGATGAGTTATTGCTGAGATCTTTGGAGGATGGACTCAGAGCTCTCTTAACTATTGAAATACGTGGTTGCAAGCTCCATGGCAAGTTTAGTGCCCCACCACCACCTCTTCAGGCAGCTGCTTTTTCTCGTGGAGTTGTGACCATGCGATGTGATATATCAACTTGTAGTTCTGCACATATCTCACTTCTGGTATCCGGCAGTGCACAAACTTGTTTTAATGATCAGCTCTTGGAGAATCATATAAAAAATGAGATAATTGAGAAGAGTCAACTAGTTCACGCACAACTCAACAATGAGGGAAACAAAGAGAACATCTCTGAACCTCGCAGATCTGCTTCTATTGCCTGTGGAGCATCTGTATTTGAAATTTGCATGAAGCTTCCTCAATGGGCTTTGCAGATTTTGAGACAGCTAGCACCTGAAGTTTCTTATCGAAGTTTAGTTGCACTTGGCATTGCTAGTATTCAGGGATTGCCAATAGCTTCTTTTGAGAAAGATGATGCTGAACGCTTACTTTTCTTCTATAAAAACTGTGAGAAAGATAGCTGTACAATCAAAAATAATATAATTTTTAGCAGTCCCCCTGGTTGGTTGAAACCACCCCCTCCTACTAAGAAAAGGTGTGAACCAAGCCAAGGGGATAGCCCTGGTCTTCATGAAGGTGTCTTTGCAGGGCAGGGTAGTGTTCATAAATTAAATGAAGAGGAAAAGGATAGAAAAATGGTCAATGGGATTAGCACGCCATTAACTCCTGCTAGGCAGAGATTGAAAGTATCTGCAATGAGGCCAATTCCTCACATTCATCGCCATAGAATGACACCTTTTTGTGGACCTTCTGAGACAGATGGTTTTGATGGCACTCAGGTGGAGGCTATTTTGCCACTTGTTGCCCCTACGAAGCGTAGTAGTATTGGATCAACATCTGGAACACACAGAAAATCATTTTCAAGCGCAGCTCAGTCTAAGCAGGTTATTTCATTGAACCCATTGCCTCTTAAGAAACATGGTTGCGGTAGAGGCCCCGTACAGACATGCTCTGAGGAGGAATTTCTTAAAGATGTCATGGAGTTTCTGATTCTCCGGGGACATAATAGACTGATTCCTCAAGGAGGGCTTACCGAGTTCCCTGATGCCATACTCAATGGAAAACGTCTTGATCTCTACAACTTGTATAAAGAGGTGGTTACCAGGGGAGGATTTCATGTTGGCAATGGCATCAACTGGAAGGGACAAATCTTTTCAAAGATGCGCAATTACACCACAACCAATAGAATGACTGGTGTTGGGAATACTCTCAAACGACATTATGAGACCTACCTTTTAGAATATGAATTAGCACATGATGATGTGGATGGAGAATGTTGCTTGTTGTGTCACAGTAGTGCAGCTGGTGATTGGGTGAATTGTGGCATATGTGGTGAGTGGGCCCACTTTGGCTGTGACAGAAGGCAGGGTCTTGGTGCATTTAAGGATTATGCAAAAACAGATGGGCTAGAATATATATGTCCTCATTGTAGTGTTACAAATTTCAAGAAGAAACAAAATTTTGCTAATGGTTATTCTCAAGGGTTAATGTCTTCACGACCCCTTTGA 2349 0.4308 MFPFHSQGAPKYTCTLLAVTCGTSSAEHKLSHAERTYPFPEFVSAGRLEVQTLRSPEKEQFRKVLESYQPNFVYLQGEQLENGEVGPLVWQGVELSTCEDTTELFGSTLPTAVYLEIPNGESFAEALHLKGIPYVIFWKNAFSCYAACHFLQAFLSVVQSSSTHTWDAFHLARASFELYCVQNNQVLPSDSDDANSEMGPHLLGDRLKINVDPPEIDEEDDDESSPGSLPAIKIHEDEVNLRFLICGAPSTVDELLLRSLEDGLRALLTIEIRGCKLHGKFSAPPPPLQAAAFSRGVVTMRCDISTCSSAHISLLVSGSAQTCFNDQLLENHIKNEIIEKSQLVHAQLNNEGNKENISEPRRSASIACGASVFEICMKLPQWALQILRQLAPEVSYRSLVALGIASIQGLPIASFEKDDAERLLFFYKNCEKDSCTIKNNIIFSSPPGWLKPPPPTKKRCEPSQGDSPGLHEGVFAGQGSVHKLNEEEKDRKMVNGISTPLTPARQRLKVSAMRPIPHIHRHRMTPFCGPSETDGFDGTQVEAILPLVAPTKRSSIGSTSGTHRKSFSSAAQSKQVISLNPLPLKKHGCGRGPVQTCSEEEFLKDVMEFLILRGHNRLIPQGGLTEFPDAILNGKRLDLYNLYKEVVTRGGFHVGNGINWKGQIFSKMRNYTTTNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPHCSVTNFKKKQNFANGYSQGLMSSRPL 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00422 782 SMART ARID_2 593 696 - -
Gma07g00422 782 Gene3D - 594 699 IPR036431 GO:0003677
Gma07g00422 782 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 5 772 - -
Gma07g00422 782 MobiDBLite consensus disorder prediction 446 475 - -
Gma07g00422 782 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 700 763 IPR013083 -
Gma07g00422 782 SUPERFAMILY ARID-like 596 711 IPR036431 GO:0003677
Gma07g00422 782 MobiDBLite consensus disorder prediction 553 572 - -
Gma07g00422 782 CDD PHD_ARID4_like 706 757 - -
Gma07g00422 782 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 5 772 IPR042293 -
Gma07g00422 782 SUPERFAMILY FYVE/PHD zinc finger 692 760 IPR011011 -
Gma07g00422 782 Pfam ARID/BRIGHT DNA binding domain 599 696 IPR001606 GO:0003677
Gma07g00422 782 SMART bright_3 597 701 IPR001606 GO:0003677
Gma07g00422 782 CDD ARID 598 696 - -
Gma07g00422 782 ProSiteProfiles ARID domain profile. 596 700 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00422 Gma-Chr7 3831009 3844136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00422 4 771 ARID Transcription Factor Family AT3G43240 60.438 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Gma07g00422 ARID 2.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00422 - - gmx:100820590 1579.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00422 07 3831009 3844136 Gma07g00422 07 3831009 3844136 ECH
Gma07g00422 07 3831009 3844136 Gma16g00116 16 1142176 1151715 GST