Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00401 ATGGACGACGACGACGAGATCCAGTCGCATCCTTCGCCGGCGAGCGGATCCCCTCCGTCGTCGCCGAGGGCGAACGGTCGGATAACGGTGACGGTCGCGGCTCCGGCGCCGCCACCACCGCCGAACAGTCTGGCATTAGCGCTTCCGATTCAGCAGCCGGCGAAGGGAAACGGCGGAGGAGGAGGCGGCGGCGGCGGAAGGGAGGATTGCTGGAGCGAAGGTGCGACGGCGGTGCTGATCGACGCGTGGGGAGAGAGGTATCTGGAACTGAGCAGAGGAAATCTGAAGCAGAAGCACTGGAAGGAGGTGGCGGATATCGTGAGCGTCAGAGAGGATTACACGAAGGCGCCGAAGACCGATATCCAGTGCAAAAACCGGATCGACACCGTTAAGAAGAAGTACAAATCGGAGAAGGCGAAGATCGCCGCCGGCGCCACCAGCAAGTGGCCGTTCTATGACCGACTGGAACAATTAATCGGTCCAAGCGCCAAGATCCCCGGCGTCGGCGGTGCCTCCGGCACCAGCGCTGCCGGAAACAGTAATTTACAACCGCAGAAAGTTCCGTTAGGAATTCCGGTCGGCGTTCGCGGCGGCGCGAATCAGTTTAACCATCCTCATAAACAGCCACAACCGGTTCCGTTGAAGAACCAGAAGATTCAGTTCCGGCGCCGCGGTCCTCCGGTGGAGTCCGATTCGGAGGAGCGAGACGCGTCGTCGCCGGCGTCGAGCGACAGTTTTCCGCCGGAGAGTTTCGAGAGGAAGAGGCCGCGGTTGATGAGTTCAAACACCACGAAAGGAAGCGGAGAAAGACGGAAGGCGAAGGGTTGGGGAAGCGCGGTGAGGGAACTGACGCAGGCGATTCTGAAATTCGGCGAGGCGTATGAACAAGCGGAGAGTTCGAAGCTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAATTCGCAAAGGATTTGGAGTTGCAGAGAATGCAGTTTTTCATGAAGACCCAGGTAGAGATTTCGCAGCTCAAACTTGGAAGAAAAGGTGGTAACCCTAGCAACAACCACCATGGCACCACCAACAATAACAACAGCAATCATAACAATAATAGTGGCAGTGAATGA 1107 0.5763 MDDDDEIQSHPSPASGSPPSSPRANGRITVTVAAPAPPPPPNSLALALPIQQPAKGNGGGGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSVREDYTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAGATSKWPFYDRLEQLIGPSAKIPGVGGASGTSAAGNSNLQPQKVPLGIPVGVRGGANQFNHPHKQPQPVPLKNQKIQFRRRGPPVESDSEERDASSPASSDSFPPESFERKRPRLMSSNTTKGSGERRKAKGWGSAVRELTQAILKFGEAYEQAESSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQVEISQLKLGRKGGNPSNNHHGTTNNNNSNHNNNSGSE 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00401 368 MobiDBLite consensus disorder prediction 341 368 - -
Gma07g00401 368 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 338 IPR044823 -
Gma07g00401 368 MobiDBLite consensus disorder prediction 162 279 - -
Gma07g00401 368 MobiDBLite consensus disorder prediction 10 27 - -
Gma07g00401 368 MobiDBLite consensus disorder prediction 337 368 - -
Gma07g00401 368 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 338 - -
Gma07g00401 368 MobiDBLite consensus disorder prediction 1 69 - -
Gma07g00401 368 Gene3D - 71 136 - -
Gma07g00401 368 MobiDBLite consensus disorder prediction 222 238 - -
Gma07g00401 368 Pfam Myb/SANT-like DNA-binding domain 68 158 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00401 Gma-Chr7 3629815 3631276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00401 1 351 Trihelix Transcription Factor Family AT3G14180 48.157 8.70e-108 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma07g00401 Myb_DNA-bind_4 2.8e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00401 - - gmx:100812599 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00401 07 3629815 3631276 Gma07g00401 07 3629815 3631276 ECH