Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00389 ATGTCAAGCTTCCCCAACACGGTGGCGGAAGGCCGCATGTCCGGCAAGGCACCGGAAAAATCCACCTTTTCTCAGACTTGCAGCCTCTTGAGCCAGTTCTTGAAGGAGAAACGTGCTTCTGCTGATTCCACCCTTGGAATTGGTGGAAAAATGGAACCTAAAGCGAATACCAAGGCTTTGTTAGGAAGCTTGCAAAACTCTGATGGGGCCTTAAAGCTAAGCGCTTCTGCCATGGAATTTCTTCCCCAGCTTGTGGAAAACCCCTGCATTAAGAAGTCTAGGTCACCGGGACCTGAATCTCCCCAATTGACAATATTCTATGCCGGAAAAATGTTGGTATTTGATGCCTTTCCGCCGGAGAAGGCGACAGAGGTCATGGAGATGGCCACCAAGTTGGCCTCGAACAACTCCGGCACTGAAGAAAGTCCCCCTAGCCTTCCGGTTACCACTGAAAAATTGGCTGTGTCCAAGATGCCTCAAACAAACACATCCTCAGAAACCCCTAAGCCCGGAAACCAAGGGGTTGGTTCAGATATGAGGTACCCAAGGAGAGCTTCACTTCTAAAATTTCTTGAGAAAAGAAAAGAAAGGGTCAATGCTAGAGGGCCATACCAAATGAACAATCTCAAGCCAGAAGGAAGCAGTTCAGGTGGTGAACCTGAAGATCAGTGTTCCAAACAGTTTGACCTTAACTTTTAG 699 0.4807 MSSFPNTVAEGRMSGKAPEKSTFSQTCSLLSQFLKEKRASADSTLGIGGKMEPKANTKALLGSLQNSDGALKLSASAMEFLPQLVENPCIKKSRSPGPESPQLTIFYAGKMLVFDAFPPEKATEVMEMATKLASNNSGTEESPPSLPVTTEKLAVSKMPQTNTSSETPKPGNQGVGSDMRYPRRASLLKFLEKRKERVNARGPYQMNNLKPEGSSSGGEPEDQCSKQFDLNF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00389 232 MobiDBLite consensus disorder prediction 185 200 - -
Gma07g00389 232 MobiDBLite consensus disorder prediction 133 232 - -
Gma07g00389 232 MobiDBLite consensus disorder prediction 208 232 - -
Gma07g00389 232 Pfam Jas motif 183 205 IPR018467 -
Gma07g00389 232 Pfam tify domain 98 129 IPR010399 -
Gma07g00389 232 ProSiteProfiles Tify domain profile. 96 131 IPR010399 -
Gma07g00389 232 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 9 226 - -
Gma07g00389 232 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 226 IPR040390 -
Gma07g00389 232 MobiDBLite consensus disorder prediction 1 23 - -
Gma07g00389 232 SMART tify_2 96 131 IPR010399 -
Gma07g00389 232 MobiDBLite consensus disorder prediction 154 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00389 Gma-Chr7 3519647 3527605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00389 8 206 Tify Gene Family AT1G19180 32.456 1.06e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gma07g00389 tify 3.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00389 K13464 - gmx:100778559 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00389 07 3519647 3527605 Gma07g00389 07 3519647 3527605 ECH
Gma07g00389 07 3519647 3527605 Gma16g00087 16 905142 908196 GST