Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00387 ATGGCCATAGCTCGGGCAATAATCCTCCAGCAATCTCTCATCATCATCGTGACTTTGCCTGTGATATATTCCATGACAGAAGCTGAAGCTTTGGTGAGTTTCAAAAGCTCCTTCTCCAACGCTGAACTTTTGGATAGTTGGGTCCCCGGTTCTGCACCCTGCAGTGAAGAAGATCAATGGGAAGGTGTAACTTGCAACAACGGCGTCGTCACGGGGCTTCGCCTTGGAGGAATGGGGTTAGTAGGGGAAATACACGTTGATCCATTGCTTGAACTCAAGGGTCTTCGACAAATAAGCCTCAACGACAATTCTTTCTCAGGTCCCATGCCTGAGTTCAACAGAATTGGGTTCCTGAAGGCCCTGTATTTGCAAGGAAACAAGTTTTCTGGGGATATTCCCACGGAATACTTCCAGAAAATGAGGTCTTTGAAGAAAGTGTGGCTATCTGATAACCTATTCACGGGGAAGATTCCATCGTCGTTGGCCGATATTCCTCAGCTTATGGAGTTGCACCTTGAGAACAACCAGTTTAGTGGAAACATTCCCGATCTGAGTAACCCGTCGTTGGCGATATTCGATGTCTCGAACAACAAATTGGAAGGTGGAATCCCTGCTGGTTTGTTGAGATTCAACGATAGTTCTTTTTCAGGGAATTCTGGTCTTTGTGATGAGAAGTTAAGGAAATCATGTGAAAAGACAATGGAGACCCCAAGTCCTGGTCCCATTGATGACGCACAAGACAAGGTTGTTGGTGACCATGTGCCTTCTGTGCCACATAGTAGTAGCTCATTCGAGGTTGCTGGCATTATAGTAGCGAGTGTGTTTCTTGTCTCACTAGTTGTGCTTTTAATTGTGAGATCAAGGAGAAAGAAGGAGGAGGAGAATTTTGATCATATAGTTGGACAACAAGTTAATGAAGGTGGTGCAGTGGAAGTTCAAGTGACTGCACCAGTGAAAAGGGTTTTGGATGCAGCTTCAACTTCAAGTACACCAATGAAAAAAACATCGTCCAGAAGGGGATCTATATCTTCTCAGAGCAAAAACGTTGGAGAGCTTGTGACGGTGAATGATGAGAAGGGCGTGTTTGGGATGTCTGATTTGATGAGAGCAGCCGCCGAAGTGCTTGGAAATGGAAGCTTTGGATCTTCTTACAAGGCCGTGATGGCTAATGGAGTGGCAGTGGTGGTGAAGAGGACTAGAGAAATGAATGTTCTGGAGAAAGATGATTTTGATGCAGAGATGAGGAAGCTTACAAAGCTTAAACACTGGAATATATTGACCCCTTTAGCTTATCATTTCAGAAAGGATGAGAAACTAGTGATCTCTGAGTATGTTCCAAGAGGCAGTCTATTGTTTTCCCTGCATGGTGATAGGAGACCATCACATGCTGAGCTAGATTGGCCAGCACGTATGAAGATTGTACGAGGAATTGCCGAAGGAATGCATTATCTTTACACAGAACTTAGTTCCTTGGATCTCCCACATGGCAATCTCAAGTCCAGCAATGTTCTCCTTGGACCAGACAATGAACCAATGCTTGTAGATTACGGGTTCAGCCACATGGTTAACCCTTCAAGCGCTGCAAACACACTATTTGCTTACAAGGCACCAGAGGCAGCACAACATGGCCAAGTTTCGCGTAGTTGTGATGTTTACTGTCTCGGGGTTGTGATAATTGAGATACTAACAGGAAAGTACCCTTCTCAATATCTCAGCAATGGAAAGGGTGGAGCCGATGTGGTGCAATGGGTTGAAACTGCAATCTCTGAGGGAAGGGAAACAGAAGTGCTTGATCCTGAGATTGCAAGCTCTAGGAATTGGCTTGGTGAGATGGAGCAACTCCTCCACATTGGTGCTGCTTGCACTCAAAGCAACCCTCAGCGGCGGTTAGACATGGGAGAAGCCGTTAGAAGGATAAAGGAGATTAACACTGAGGGTGGACAAGAATCAAGAACAATAGAGGAGACATGGAACCAAGGGTATCATGATCAACAATCACAGAGGAGACATGGAACAAACAGCTTCGATAATATTCAGTTAATGTAA 2046 0.4506 MAIARAIILQQSLIIIVTLPVIYSMTEAEALVSFKSSFSNAELLDSWVPGSAPCSEEDQWEGVTCNNGVVTGLRLGGMGLVGEIHVDPLLELKGLRQISLNDNSFSGPMPEFNRIGFLKALYLQGNKFSGDIPTEYFQKMRSLKKVWLSDNLFTGKIPSSLADIPQLMELHLENNQFSGNIPDLSNPSLAIFDVSNNKLEGGIPAGLLRFNDSSFSGNSGLCDEKLRKSCEKTMETPSPGPIDDAQDKVVGDHVPSVPHSSSSFEVAGIIVASVFLVSLVVLLIVRSRRKKEEENFDHIVGQQVNEGGAVEVQVTAPVKRVLDAASTSSTPMKKTSSRRGSISSQSKNVGELVTVNDEKGVFGMSDLMRAAAEVLGNGSFGSSYKAVMANGVAVVVKRTREMNVLEKDDFDAEMRKLTKLKHWNILTPLAYHFRKDEKLVISEYVPRGSLLFSLHGDRRPSHAELDWPARMKIVRGIAEGMHYLYTELSSLDLPHGNLKSSNVLLGPDNEPMLVDYGFSHMVNPSSAANTLFAYKAPEAAQHGQVSRSCDVYCLGVVIIEILTGKYPSQYLSNGKGGADVVQWVETAISEGRETEVLDPEIASSRNWLGEMEQLLHIGAACTQSNPQRRLDMGEAVRRIKEINTEGGQESRTIEETWNQGYHDQQSQRRHGTNSFDNIQLM 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00387 681 Gene3D Ribonuclease Inhibitor 21 114 IPR032675 -
Gma07g00387 681 SUPERFAMILY L domain-like 25 210 - -
Gma07g00387 681 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 648 - -
Gma07g00387 681 Gene3D Ribonuclease Inhibitor 117 232 IPR032675 -
Gma07g00387 681 SUPERFAMILY Protein kinase-like (PK-like) 373 638 IPR011009 -
Gma07g00387 681 ProSiteProfiles Protein kinase domain profile. 369 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00387 681 Pfam Protein kinase domain 373 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00387 681 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Gma07g00387 681 Gene3D Transferase(Phosphotransferase) domain 1 445 667 - -
Gma07g00387 681 MobiDBLite consensus disorder prediction 325 345 - -
Gma07g00387 681 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 648 - -
Gma07g00387 681 MobiDBLite consensus disorder prediction 659 681 - -
Gma07g00387 681 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Gma07g00387 681 Gene3D Phosphorylase Kinase; domain 1 337 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00387 Gma-Chr7 3493159 3495705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00387 13 642 Receptor kinase-like Gene Family AT3G42880 43.235 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma07g00387 Pkinase 3.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00387 - - gmx:100809208 1296.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00387 07 3493159 3495705 Gma07g00387 07 3493159 3495705 ECH
Gma07g00387 07 3493159 3495705 Gma16g00086 16 887645 890147 GST