Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00373 ATGCCTTCCAAGAGGCTTCAATGGAGATCCTTAGTACTTGGTTGTTTCAAGGCCACCAAGAACCAATCCTTGGAATCTCCAAACATAGTTTCCAAGAAGTCATCTTCAAGTAGAATCTTCCTTTCTGATTTAAGCCTAAGCGATTATTCATCAGTTTCTATCATGAGTGATTTATCCAATTCTCTTGTGGGATCAAATCTTCGTATTTTCACCTACCAGGAGCTCTCAGAGGTTACACACAACTTCAGCAAATCCAACTATCTTGGGGAAGGTGGGTTTGGGAAGGTTTTTAAAGGGTTTATTGATGACAATCTTAAGCCTGGATTGAAAGCTCAGACTGTGGCAGTTAAGGCCTTAAACTTGGATGGAAAACAAGGCCATAGAGAGTGGTTGGCTGAAGTAGTCTTTCTGGGACAATTGAAACATAGGCATCTGGTTAACTTAATTGGCTACTGCTGTGAAGATGAGCATAGGCTTCTTGTGTATGAATACATGGAGAGGGGCAATCTAGAGGAAAAGCTTTTCAAAGGTTACTTAGCAGCCTTGCCTTGGCTAACAAGAATCAAAATAGCAATTGGGGCCGCAAAGGGACTTATGTTTCTTCATGAAGAAGAGAAACCAGTCATATATAGAGATATCAAGGCCTCAAACATTCTATTGGACGCTGATTACAATGCCAAGCTCTCTGATTTCGGTTTAGCAATAGATGGACCAGAAAAAGACCAAACACACATAACAACTCGTGTGATGGGTACGCATGGTTATGCTGCCCCTGAGTACATCATGACAGGCCATTTGACAACAATGAGTGATGTATATAGCTTTGGAGTTGTTCTCCTAGAGCTCCTCACAGGAAAGAAGTCTGTGGACAAGAAAAGACCCACCAGAGAGCAGGATTTGGTGGAATGGGCAAGGCCTTTGTTGAAAGATTCCCATAAACTAGAAAGAATAATGGACACAAGACTTGAGGATCAGTACTCAACAGAAGGGGCTAGAAAATTTGCAGCCTTGGCTTATCAATGTCTTAGCCATCATGCAAAGGCTAGGCCCACCATGAGAACCGTGGTTAGGACCCTAGAGCCTCTATTGGAACTGAAAGATATCCCAGTTGGCCCATTTGTGTATGTGGTACCCAGTGAAGAAGAATCAACCAAAGTGAATGAAAAAGTAACAGAAAATGAGCATGTTGAGATCAACCAAGGTGAGTTAAAAAACAAAGAAAAAGAAGAAGAAGAAAAGGGAGACAAAAAAGAAAAGGGTCACCACCGGCAACGAAAAAGTCGTCGCAATAGACGTCGTGTTAAGCCACTGAGGTCTCTTACTGCTTACTCTGACACTGCTCTGTATAAAACTCTTGGTACAAATCTGTACTCTCCAAAACAATCACAATAA 1392 0.4181 MPSKRLQWRSLVLGCFKATKNQSLESPNIVSKKSSSSRIFLSDLSLSDYSSVSIMSDLSNSLVGSNLRIFTYQELSEVTHNFSKSNYLGEGGFGKVFKGFIDDNLKPGLKAQTVAVKALNLDGKQGHREWLAEVVFLGQLKHRHLVNLIGYCCEDEHRLLVYEYMERGNLEEKLFKGYLAALPWLTRIKIAIGAAKGLMFLHEEEKPVIYRDIKASNILLDADYNAKLSDFGLAIDGPEKDQTHITTRVMGTHGYAAPEYIMTGHLTTMSDVYSFGVVLLELLTGKKSVDKKRPTREQDLVEWARPLLKDSHKLERIMDTRLEDQYSTEGARKFAALAYQCLSHHAKARPTMRTVVRTLEPLLELKDIPVGPFVYVVPSEEESTKVNEKVTENEHVEINQGELKNKEKEEEEKGDKKEKGHHRQRKSRRNRRRVKPLRSLTAYSDTALYKTLGTNLYSPKQSQ 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00373 463 ProSiteProfiles Protein kinase domain profile. 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00373 463 MobiDBLite consensus disorder prediction 419 436 - -
Gma07g00373 463 Gene3D Phosphorylase Kinase; domain 1 53 164 - -
Gma07g00373 463 Coils Coil 393 413 - -
Gma07g00373 463 SUPERFAMILY Protein kinase-like (PK-like) 57 359 IPR011009 -
Gma07g00373 463 MobiDBLite consensus disorder prediction 384 418 - -
Gma07g00373 463 SMART serkin_6 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00373 463 Pfam Protein tyrosine and serine/threonine kinase 85 359 IPR001245 GO:0004672|GO:0006468
Gma07g00373 463 PANTHER OS01G0588500 PROTEIN-RELATED 29 418 - -
Gma07g00373 463 ProSitePatterns Protein kinases ATP-binding region signature. 88 117 IPR017441 GO:0005524
Gma07g00373 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Gma07g00373 463 PANTHER BNAA02G16030D PROTEIN 29 418 - -
Gma07g00373 463 Gene3D Transferase(Phosphotransferase) domain 1 165 368 - -
Gma07g00373 463 CDD STKc_IRAK 88 362 - -
Gma07g00373 463 MobiDBLite consensus disorder prediction 384 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00373 Gma-Chr7 3334683 3336610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00373 68 394 Glycoside Hydrolase AT3G07070 47.734 1.68e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma07g00373 PK_Tyr_Ser-Thr 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00373 - - gmx:100790454 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00640 09 7260471 7264012 Gma07g00373 07 3334683 3336610 ECH
Gma07g00373 07 3334683 3336610 Gma07g00373 07 3334683 3336610 ECH
Gma07g00373 07 3334683 3336610 Gma14g00992 14 11808614 11811081 ECH
Gma07g00373 07 3334683 3336610 Gma17g02091 17 38240133 38260340 ECH
Gma07g00373 07 3334683 3336610 Gma04g00526 04 4692713 4695673 ECH
Gma07g00373 07 3334683 3336610 Gma06g00516 06 4399927 4402906 ECH
Gma07g00373 07 3334683 3336610 Gma16g00071 16 718912 721287 GST