Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma07g00358 | ATGAGTAACTGGTTGGGGTTCTCTCTGACTCCACACTTGAGGATTGATgaagaatttgagagagagaaccaagagcgtggagcaggaggaggaggagggtaccatcatccttctccttcttctcaccctcACTTGTCTGTTATGCCTCTTCGCTCTGATGGCTCTCTCTGTGTTGCTGACTCCTTTAGCCACTCTGCTGCATCTCAAGAATGGAGATATGATAGTGCAATAGGTGGAGGGAATTCCAACGAGAAAGGTCCAAAGCTTGAGGACTTTTTGGGTGGCTACTCAAACTCCCCCACTAAGGTTTTTTGCCAAGACACTCAGCATGACCAAAACCAAAGCCAGAACAATGTTTCCAAAATCAATGTTAATGTAGCACCAAGCTTTTGCACCAATGCAGAGATTGAAACTGGGGAGAGCCTCGCTAACCCTTATCCCCACCAATCTTTCCATGCATATAATGATAACTCACATGCCCTTATCCCCACCAATGGCATGTACAAGTCCTGGTTGGCACAAACTCAGTTTTCTTCTGATGGAAAACCTTCAACTGAAGCTAATGGGTGCAATTTCCAATCTCTGTCCCTCTCTATGAGCCCCGGTATGCAAAATGGGGTGGGTGCAATTTCCTCTGTTCAAGTGAGTGAGGATAGTAGGAAACGGGTCATGGCAAAATCTCATGCTAGAGAACCAGTCCCTCGCAAATCTATTGACACTTTTGGGCAGAGAACATCTCAATACCGTGGTGTTACAAGGCATAGATGGACTGGGAGATATGAGGCCCATTTGTGGGACAATAGTTGCAGAAAGGAAGGGCAAACAAGGAAAGGAAGGCAAGGTGGTTATGATAAGGAAGAAAAAGCAGCAAAGGCTTATGACTTAGCTGCAATCAAGTATTGGGGTCCAACAACTCACATAAATTTCCCTTTAAGCACTTATGAGAAGGAACTTGAAGAGATGAAGCACATGACCAGGCAAGAATTTGTCGCCAATTTAAGAAGGAAGAGCAGCGGATTTTCAAGAGGGGCATCTGTGTATAGAGGTGTGACAAGACACCATCAACATGGAAGGTGGCAGGCCCGAATAGGAAGGGTTGCCGGAAACAAGGACTTGTATCTTGGTACATTTAGCACACAAGAAGAAGCTGCTGAAGCATATGATATAGCAGCAATCAAGTTCAGGGGAACAAGTGCTGTGACCAACTTTGACATAAGTAGGTATGATGTGAAGAGAATCTGCTCAAGCTCCACTCTCATTGCAGGAGATCTTGCAAAACGGTCTCCTAAAGAATCACCAGCTCTGGTTCCTGCCGAGGACTTCAATTCGTGTGGTTCATCGATGCCGCCGGCATCTCAGCCCCCTCCTTTGGCTATAACTGATGGTGAACATTCTGATGAGTTGTCCAACATGATGTGGAATGCCAACAGCGATGTGCATGCACAGAATGAGAATGGTGCTAACATCAACAACAATGTCACTGAATCATCATCACAACAGGTTTCACCAAGCAGCAACAAGGATGCTTTGAACCCTCAAAGCCCCAAGTGTTCTGTGGGGCTACCCAATGAGTTTGGAGTCAGTGGAGCAGATTATGGACATGGGTACTTCACCCTTGATGGACCAAAATATGATGATGGGAACAATGAAAACGACCACATGAGCACCAACAGGCTTGGAAATTTGGGATTGGTTAATCAAGTTCCCATGTTTGCTTTGTGGAATGAATGA | 1731 | 0.4321 | MSNWLGFSLTPHLRIDEEFERENQERGAGGGGGYHHPSPSSHPHLSVMPLRSDGSLCVADSFSHSAASQEWRYDSAIGGGNSNEKGPKLEDFLGGYSNSPTKVFCQDTQHDQNQSQNNVSKINVNVAPSFCTNAEIETGESLANPYPHQSFHAYNDNSHALIPTNGMYKSWLAQTQFSSDGKPSTEANGCNFQSLSLSMSPGMQNGVGAISSVQVSEDSRKRVMAKSHAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQGGYDKEEKAAKAYDLAAIKYWGPTTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIAGDLAKRSPKESPALVPAEDFNSCGSSMPPASQPPPLAITDGEHSDELSNMMWNANSDVHAQNENGANINNNVTESSSQQVSPSSNKDALNPQSPKCSVGLPNEFGVSGADYGHGYFTLDGPKYDDGNNENDHMSTNRLGNLGLVNQVPMFALWNE | 576 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma07g00358 | 576 | MobiDBLite | consensus disorder prediction | 482 | 515 | - | - | |
| Gma07g00358 | 576 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM | 4 | 499 | - | - | |
| Gma07g00358 | 576 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 4 | 499 | - | - | |
| Gma07g00358 | 576 | CDD | AP2 | 345 | 406 | IPR001471 | GO:0003700|GO:0006355 | |
| Gma07g00358 | 576 | PRINTS | Ethylene responsive element binding protein signature | 248 | 259 | IPR001471 | GO:0003700|GO:0006355 | |
| Gma07g00358 | 576 | PRINTS | Ethylene responsive element binding protein signature | 386 | 406 | IPR001471 | GO:0003700|GO:0006355 | |
| Gma07g00358 | 576 | ProSiteProfiles | AP2/ERF domain profile. | 247 | 310 | IPR001471 | GO:0003700|GO:0006355 | |
| Gma07g00358 | 576 | SUPERFAMILY | DNA-binding domain | 246 | 312 | IPR016177 | GO:0003677 | |
| Gma07g00358 | 576 | MobiDBLite | consensus disorder prediction | 426 | 463 | - | - | |
| Gma07g00358 | 576 | SUPERFAMILY | DNA-binding domain | 345 | 406 | IPR016177 | GO:0003677 | |
| Gma07g00358 | 576 | Gene3D | AP2/ERF domain | 246 | 312 | IPR036955 | GO:0003700|GO:0006355 | |
| Gma07g00358 | 576 | Gene3D | AP2/ERF domain | 346 | 406 | IPR036955 | GO:0003700|GO:0006355 | |
| Gma07g00358 | 576 | Pfam | AP2 domain | 247 | 302 | IPR001471 | GO:0003700|GO:0006355 | |
| Gma07g00358 | 576 | Pfam | AP2 domain | 345 | 396 | IPR001471 | GO:0003700|GO:0006355 | |
| Gma07g00358 | 576 | CDD | AP2 | 246 | 312 | IPR001471 | GO:0003700|GO:0006355 | |
| Gma07g00358 | 576 | ProSiteProfiles | AP2/ERF domain profile. | 346 | 404 | IPR001471 | GO:0003700|GO:0006355 | |
| Gma07g00358 | 576 | MobiDBLite | consensus disorder prediction | 21 | 47 | - | - | |
| Gma07g00358 | 576 | SMART | rav1_2 | 247 | 316 | IPR001471 | GO:0003700|GO:0006355 | |
| Gma07g00358 | 576 | SMART | rav1_2 | 346 | 410 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma07g00358 | Gma-Chr7 | 3201914 | 3205247 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gma07g00358 | 1 | 434 | AP2-EREBP Transcription Factor Family | AT1G72570 | 51.178 | 2.84e-137 | 403 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | AP2/ERF-AP2 | Gma07g00358 | AP2 | 3.3e-09 | CL0081 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma07g00358 | K09285 | - | gmx:100805489 | 1135.55 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma07g00358 | 07 | 3201914 | 3205247 | Gma07g00358 | 07 | 3201914 | 3205247 | ECH | |
| Gma07g00358 | 07 | 3201914 | 3205247 | Gma16g00061 | 16 | 607667 | 611008 | GST |