Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00356 ATGAGAAGAAGTCCTTGTTGTTCTAAGGAAGGGTTGAACAAAGGAGCATGGACAGCTCTGGAGGATAAAATTTTGACAGAATACATTAACATTCATGGCGAAGGAAAATGGAGACACTTGCCCAAAAGAGCAGGTCTTAAGAGATGTGGAAAAAGTTGCAGGCTAAGATGGTTGAATTATCTAAGACCTGACATTAAAAGAGGCAACATAACTAATGATGAAGAGGCGCTTATAATCAGGCTTCACAGTCTTCTCGGAAACAGGTGGTCCTTGATTGCTGGACGGCTTCCAGGACGAACAGACAATGAAATCAAGAATTATTGGAACACCAACATTGGAAGGAAACTTCAAAATGGTGGTGCAGGAAGCACTTTAAACACAAATATTCAACAAGATCAAAACGTTAAAGACCAAGAGTGGCACTATGATAAGGGTTCGTGTCTTGTTCAGACAAAAGCAACAACGTGGACTAATAAGGTCACAGTCACCAATGAAATTAGTCGACACAATGAAGGGATTATAATTAAGAGCAATGTTATCGGTGATAACAAAATGAAGGGTTTTCTATTGTCTCCATCTAAAGAGAGTAACAATGATCCAGTGTTGGATTTCATGGCAGATCTTGAAATGGATGGAAACTTCTTCTCGGAGCTCATTGAGACGGATTTGCCGGAATCATCTTGTCAAGAAAATAAGATATTGGAAGATAACGGTAACCCTATAATGGTTGATAAAGTCTACTTATCTCCAAAATCATCCAGTGATACCATCCACTTCCCTTGGGGTGATTCATGGTATGATACAAATTTTGATTTTTTACCAGTGACAATTTTTATGGAGTCCGGATTTGATTGGCTCTGA 861 0.3902 MRRSPCCSKEGLNKGAWTALEDKILTEYINIHGEGKWRHLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITNDEEALIIRLHSLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGRKLQNGGAGSTLNTNIQQDQNVKDQEWHYDKGSCLVQTKATTWTNKVTVTNEISRHNEGIIIKSNVIGDNKMKGFLLSPSKESNNDPVLDFMADLEMDGNFFSELIETDLPESSCQENKILEDNGNPIMVDKVYLSPKSSSDTIHFPWGDSWYDTNFDFLPVTIFMESGFDWL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00356 286 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Gma07g00356 286 SMART sant 13 63 IPR001005 -
Gma07g00356 286 SMART sant 66 114 IPR001005 -
Gma07g00356 286 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gma07g00356 286 CDD SANT 16 61 IPR001005 -
Gma07g00356 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gma07g00356 286 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gma07g00356 286 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 244 - -
Gma07g00356 286 CDD SANT 71 112 IPR001005 -
Gma07g00356 286 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gma07g00356 286 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Gma07g00356 286 Gene3D - 14 66 - -
Gma07g00356 286 Gene3D - 70 143 - -
Gma07g00356 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gma07g00356 286 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00356 Gma-Chr7 3189480 3190946 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00356 1 211 MYB Transcription Factor Family AT4G38620 51.174 2.71e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma07g00356 Myb_DNA-binding 2.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00356 K09422 - gmx:100804950 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00476 17 3914432 3915929 Gma07g00356 07 3189480 3190946 ECH
Gma07g00356 07 3189480 3190946 Gma07g00356 07 3189480 3190946 ECH
Gma07g00356 07 3189480 3190946 Gma14g01230 14 20031459 20034581 ECH
Gma07g00356 07 3189480 3190946 Gma16g00059 16 597582 598187 GST