Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00345 ATGCTCGGATGGTGCATTAATACCAATCACACGCGATCCCTTCCTCCAGCAGGCTTATCTTTTGATAATAAGTTCTCTCCTTGCATGAGTTCAGAGTCTCATTCAATTACCTTCCATTACAAGGCTGCAGAAGGCACAAACCAGACTGAATGTGTTATCTGCTTGACAAGTTTTGAAGAAGAGGAAAGTGTAAGGAAGCCTCACACTTGCAGGCACATCTTCCACACCTCTTGCATTGACCAAGTGAATTCACCAAATAGTAGAGTGGCTTTGGATGAAAATGATCGTATAATCTag 297 0.4209 MLGWCINTNHTRSLPPAGLSFDNKFSPCMSSESHSITFHYKAAEGTNQTECVICLTSFEEEESVRKPHTCRHIFHTSCIDQVNSPNSRVALDENDRII 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00345 98 Pfam Ring finger domain 50 87 IPR001841 -
Gma07g00345 98 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 24 95 - -
Gma07g00345 98 SUPERFAMILY RING/U-box 40 83 - -
Gma07g00345 98 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 93 IPR013083 -
Gma07g00345 98 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 24 95 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00345 Gma-Chr7 3084969 3085265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00345 38 80 C3H Transcription Factor Family AT2G35420 52.273 3.48e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00345 - K10664 gmx:106799209 211.46