Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00344 ATGCTCGGATGGTGCATTAATACCAATCACACGCGATCCCTTCCTCCAGCAGGCTTATCTTTTGATGATAAGTTCTCTCCTTGCATGAGTTTAGAGTCTCATTCAATTACCTTCCATTACAAGGCTGCAGAAGGCACAAACCAGACTGAATGTGTTATCTGCTTGACAAGTTTTGAAGAAGAGGAAAGTGTAAGGAAGCTTCACAGTTGCAGGCACATCTTCCACACCTCTTGCATTGATAAGTGGCTTGGCTCTCATTCTGGCTGTCCACTGTGCCGCACTCAGATTGACAAAGTGAATTCACCAAATAGCAGAGTGGCTTTGGAAGAAAATGATCGTATGATCATGGTCATTGTTAACTCCTGA 366 0.4372 MLGWCINTNHTRSLPPAGLSFDDKFSPCMSLESHSITFHYKAAEGTNQTECVICLTSFEEEESVRKLHSCRHIFHTSCIDKWLGSHSGCPLCRTQIDKVNSPNSRVALEENDRMIMVIVNS 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00344 121 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 24 113 IPR044675 -
Gma07g00344 121 ProSiteProfiles Zinc finger RING-type profile. 51 93 IPR001841 -
Gma07g00344 121 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 24 113 - -
Gma07g00344 121 SUPERFAMILY RING/U-box 40 99 - -
Gma07g00344 121 SMART ring_2 51 92 IPR001841 -
Gma07g00344 121 Pfam Ring finger domain 50 93 IPR001841 -
Gma07g00344 121 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 102 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00344 Gma-Chr7 3082236 3082601 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00344 35 107 C3H Transcription Factor Family AT5G17600 49.333 6.07e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00344 - K19038 gmx:102661636 258.455