Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00339 ATGTTGACTTGCATAGCGTGTACCAAGCAACTCAACAATGGATCTCTTCGCCAAGAAGAGGGGGAAGAAGCTGTTCACACTCCCAGCACCAAGCAAGCCATCAAGGCTCTCACTTCTCAGATCAAGGACATGGCAGTGAAGGCTTCTGGGGCATATAAGAGCTGCAGGCCATGTTCAGGATCTTCAAATGGTAACAGGAATAGGAAGTATGCAGACTCAGATATGGGGTCAGATTCAGCAAGGTTCAACTGGGCCTACCGAAGAACCGGGAGCTCCAATTCAACCCCAAGGATGTGGGGGAAGGAAGTGGAAAATGGTAGGGTGAAAGGGCTTTCAAGTGGAGAAGGAACACCAGCATCAGTGAGTGGACGAACTGAGTCAGTGGTGTTCATGGAGGAGGATGAGCCTAAGGAGTGGATTGCACAAGTTGAGCCTGGTGTGCTTATTACTTTTGTTTCATTGCCTCAGGGAGGGAATGATCTCAAGAGGATACGGTTCAGTCGTGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCAGAGAATTATGACAAGGTCATGGAATTGTACAATGTTCAAAGGTTCAATCAGCAAGCAGTTCCTCTTCCAACCCCTCCTAGATCTGAAGACGAGAGCTCAAAGATTGAATCTGCTAGGGACAGTCCTGCCACTCCTCCACTCAGCAAAGAACGTGCACCCCGGCATTTTCACCATCCAATGGGAATGGGCTACTCCTCATCAGATTCACTGGATCGCCACCAAATGCAACCCCACCCTTGCTATGAAACAAGCGGTCTGGCATCAACACCTAATCTTTCCAACATTAGTGCACCAAAGACCGAAAGATCATCCCTTGATGGTTCTGTAAGGACCAGTTCATCTGGAGAAGATCACTCAGGCGAGTTTTCAATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGAGTATACATCACTATCAGAGCACTGCCAGGTGGAACCAGAGAACTCAGACGTGTCCGGTTCAGCCGAGAAAGGTTTGGAGAAATGCATGCGAGATTGTGGTGGGAAGAGAACCGTGCTAGGATACAAGAACAATACTTGTGA 1107 0.4815 MLTCIACTKQLNNGSLRQEEGEEAVHTPSTKQAIKALTSQIKDMAVKASGAYKSCRPCSGSSNGNRNRKYADSDMGSDSARFNWAYRRTGSSNSTPRMWGKEVENGRVKGLSSGEGTPASVSGRTESVVFMEEDEPKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESARDSPATPPLSKERAPRHFHHPMGMGYSSSDSLDRHQMQPHPCYETSGLASTPNLSNISAPKTERSSLDGSVRTSSSGEDHSGEFSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSRERFGEMHARLWWEENRARIQEQYL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00339 368 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Gma07g00339 368 MobiDBLite consensus disorder prediction 262 307 - -
Gma07g00339 368 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Gma07g00339 368 ProSiteProfiles BRX domain profile. 313 368 IPR013591 -
Gma07g00339 368 MobiDBLite consensus disorder prediction 200 307 - -
Gma07g00339 368 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 368 - -
Gma07g00339 368 Pfam Transcription factor regulating root and shoot growth via Pin3 312 367 IPR013591 -
Gma07g00339 368 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
Gma07g00339 368 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 368 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00339 Gma-Chr7 3029889 3034283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00339 1 368 Major Intrinsic Protein MIP AT1G31880 49.479 5.13e-105 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00339 - - gmx:100805480 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00339 07 3029889 3034283 Gma07g00339 07 3029889 3034283 ECH
Gma07g00339 07 3029889 3034283 Gma16g00045 16 448553 452621 GST