Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00336 ATGGACTCACGCACGTATAATCCTCGCACCGTCGAAGAGGTTTTTAGGGATTTCAAGGGCCGAAGAGCTGGTCTCATCAAAGCCCTAACCACTGATGTTGAAGATTTTTACAACCAATGTGATCCTGAGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAAATTTACCTGCTGAAGAAGTACCACCAGAGCTTCCTGAGCCCGTGCTGGGCATTAACTTTGCTAGGGATGGCATGCAAGAAAAAGACTGGCTATCTTTAGTTGCTGTTCATAGTGATGCATGGTTACTTGCTATTGCATTCTATTTTGGAGCCAGATTTGGGTTTGATAAAGCTGACAGGAAACGGCTTTTCAACATGATCAATGAACTGCCAACAATATTTGAAGTTGTTACTGGTGCAGCAAAGAAGCAAGTTAAGGAGAAGTCTTCAGTTTCAAACCACAGTGGCAGCAAGTCTAAGTCCAGCTCTAAGGCACAGCGAGCTTCGGAATCTCAGGCTAGACAGCCAAAGCCATTGCAATCAAAAGAGGAGGATGAAGAACTGGACGATCAAGATGATGATGAACATGGAGAGACCTTGTGTGGGGCATGTGGTGAACATTATGGCACTGATGAATTCTGGATTTGTTGTGACATCTGTGAGAAGTGGTTCCATGATAGAAAAAGGGGGTGCATTGAGGAGTTTGAGTTGTTAGGTTGGCATGATCCAACGGGATTATCAATTATTAAGGAAATATTGAATCATTATTCATTGGTAAGAAATGCGTTATCCTTTCTAGCGGGAAGAAACGGTTGGAGTGTTGTGACACTGCCAACAATGGTGTTGGCGTATGCTGCTACGCTTTCTTCCACTCTGTCGTTTCAAAAGTCTGTTCCTTTGAATTCTCAACGTTCAGGAACATCATTTGGTTCCTCTTTCCTATTCAGCAGAGAGAATGGTTCAGTTGTTCCGTCTCTTGTTGTGTGTCATGCTAAGAAGAAACTCAGTTTTATGGAGCAAATTCTGGATTACATTGAAGGGGGTCCCAAATTAAGGAAGTGGTATGGTGCACCTGATATCCTTGAAAAAGATGGTACTGCCATAGAAGATGATGAGGATGATTATCCAGAAGATGAAGTGAGGGATGCAGTGCTGGTAACAGATGGAGATAGTGAGACGGGTCAGATGGTGATATTGTCATTGATTGTGAAAAAAGCTCGAGTAAAGACATTGGTGAAGGATAAAAGGGTTGCACTTGAAGCCTTTGGAAGTTATGTTGAGTCAATGGCAGGAGATACAAGTGACAAACGATTCCTCAAGAAAGCCCTGAGAGGAGTTCGCACAATCATATGCCCAAATGAGGGTTTTCTTTCTAGCGTTGGTAGCCTTCAAGGGGTACAACATGTAATCGTCTTATCTCAGTTGTCAGTTTATGGTGGTAAAAGTGGCTTTCAATCCATGATGAAAAGCAATGCAAAGAAACTGGCCGAGCAAGATGAATCAGTATTGAAGACATCAGGAATTCCTTACACCATAATTAGGACCGGTGCATTACTAGATGCACCTGGTGGGAAGCGAGGCTTTACCTTTGATGAGGGTTGTGCAGCTAGAGGAAGTATTAGCAAAGAAGATGCTGCCTTTGTTTGTGTAGCAGCTTTGGATTGTGTCCCACAAACTGGATTCATATTTGAGGTGGCCAATGGGGATAACAAAGTTTCAGATTGGAAAGAATGTTTGGCCACATTGATGGAGGAAACAAGTCAAAAACTTCAGTGA 1773 0.4292 MDSRTYNPRTVEEVFRDFKGRRAGLIKALTTDVEDFYNQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPVLGINFARDGMQEKDWLSLVAVHSDAWLLAIAFYFGARFGFDKADRKRLFNMINELPTIFEVVTGAAKKQVKEKSSVSNHSGSKSKSSSKAQRASESQARQPKPLQSKEEDEELDDQDDDEHGETLCGACGEHYGTDEFWICCDICEKWFHDRKRGCIEEFELLGWHDPTGLSIIKEILNHYSLVRNALSFLAGRNGWSVVTLPTMVLAYAATLSSTLSFQKSVPLNSQRSGTSFGSSFLFSRENGSVVPSLVVCHAKKKLSFMEQILDYIEGGPKLRKWYGAPDILEKDGTAIEDDEDDYPEDEVRDAVLVTDGDSETGQMVILSLIVKKARVKTLVKDKRVALEAFGSYVESMAGDTSDKRFLKKALRGVRTIICPNEGFLSSVGSLQGVQHVIVLSQLSVYGGKSGFQSMMKSNAKKLAEQDESVLKTSGIPYTIIRTGALLDAPGGKRGFTFDEGCAARGSISKEDAAFVCVAALDCVPQTGFIFEVANGDNKVSDWKECLATLMEETSQKLQ 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00336 590 Pfam Alfin 10 138 IPR021998 GO:0006355|GO:0042393
Gma07g00336 590 Gene3D - 381 584 - -
Gma07g00336 590 SUPERFAMILY FYVE/PHD zinc finger 179 224 IPR011011 -
Gma07g00336 590 Pfam NAD(P)H-binding 391 553 IPR016040 -
Gma07g00336 590 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 232 IPR013083 -
Gma07g00336 590 PANTHER CPG BINDING PROTEIN 5 226 IPR045104 GO:0006355|GO:0042393
Gma07g00336 590 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 383 582 IPR036291 -
Gma07g00336 590 MobiDBLite consensus disorder prediction 144 195 - -
Gma07g00336 590 PANTHER ALFIN-LIKE TRANSCRIPTION FACTOR 5 226 - -
Gma07g00336 590 MobiDBLite consensus disorder prediction 149 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00336 Gma-Chr7 2972997 2982686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00336 6 226 Alfin-like Transcription Factor Family AT3G42790 72.398 1.15e-97 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00336 - - gmx:100801216 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00486 17 3998308 4002516 Gma07g00336 07 2972997 2982686 ECH
Gma07g00336 07 2972997 2982686 Gma07g00336 07 2972997 2982686 ECH
Gma07g00336 07 2972997 2982686 Gma16g00041 16 372357 376547 GST
Gma15g00260 15 2250244 2255179 Gma07g00336 07 2972997 2982686 PCT
Gma07g00336 07 2972997 2982686 Gma15g00260 15 2250244 2255179 PCT