Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00321 ATGGCCAAAGAAGGTCTTGGACTTGAAATCACCGAGCTAAGGTTGGGTCTACCCGATGCGGAGCATGTAACTGTGGTCAATAAGAATGAGAAGAAGAGGGCCTTCTCGCAAATTGATGATGAAAATAGCTCCTCCGGCGGCGACCGGAAAATCAAGACCAATAAGAGTCAAGTGGTGGGGTGGCCTCCGGTGTGCTCTTACCGGAAGAAGAACAGCATGAACGAAGGTTCAAAGATGTACGTGAAGGTTAGCATGGACGGTGCTCCTTTCTTGCGCAAAATTGATTTGGGTCTCCATAAGGGGTACTCAGATTTAGCCTTGGCTTTGGACAAGCTCTTTGGTTCCTATGGAATGGTGGAGGCCTTGAAGAATGCGGACAATTCTGAACACGTTCCCATTTATGAGGACAAAGATGGTGACTGGATGCTTGTTGGAGATGTCCCTTGGGAAATGTTTATGGAGTCATGCAAGAGGCTGAGGATTATGAAGAGGTCAGATGCAAAGGGCTTCGGTTTGCAACCAAAAGGATCTCTGAAGGGATTCATAGAAAGCGCGGCAAAGTGA 564 0.477 MAKEGLGLEITELRLGLPDAEHVTVVNKNEKKRAFSQIDDENSSSGGDRKIKTNKSQVVGWPPVCSYRKKNSMNEGSKMYVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLFGSYGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSDAKGFGLQPKGSLKGFIESAAK 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00321 187 PANTHER AUXIN-RESPONSIVE PROTEIN IAA6 4 170 - -
Gma07g00321 187 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 170 IPR003311 GO:0005634|GO:0006355
Gma07g00321 187 Pfam AUX/IAA family 36 170 IPR033389 -
Gma07g00321 187 Gene3D - 73 175 - -
Gma07g00321 187 ProSiteProfiles PB1 domain profile. 78 166 IPR000270 GO:0005515
Gma07g00321 187 SUPERFAMILY CAD & PB1 domains 70 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00321 Gma-Chr7 2740780 2744540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00321 70 168 B3 DNA Binding Superfamily AT4G23980 34.343 3.37e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gma07g00321 AUX_IAA 3.3e-44 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00321 K14484 - gmx:100791342 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00321 07 2740780 2744540 Gma07g00321 07 2740780 2744540 ECH
Gma07g00321 07 2740780 2744540 Gma08g01903 08 17114767 17118209 GST
Gma07g00321 07 2740780 2744540 Gma13g03230 13 46377503 46380731 PCT
Gma07g00321 07 2740780 2744540 Gma15g00125 15 1028229 1031442 PCT