Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00319 ATGGTTGGAGGTTCATTAGCAGGGTTGCAAGAGCATCTCAAGTTAGCCCGAGACTACGCTCTCGAAGGCCTCTACGACACCTCCATCATCTTCTTCGACGGCGCCCTCGCCCAGATCAACAAGCACCTAAGCACTGTCCAAGACCCTTTAATCCGCGCGAAATGGATGAACGTAAAGAAATCACTTTCGGAGGAAACAGAAGTGGTAAAGCAGCTAGATGCAGAGAGAAGGGCTTTCAAAGACAACCCCATTGGCAGACGCCCTGCTTCGCCTCCCATTTCGGTGAAGTCATCATCGTCTTTCGTTTTTCAGCCGTTGGATGAGTACCCCACTTCATCCAGCGGTTCTGGTCCCGTTGATGATCCTGATGTGTGGCGGCCGCCCAGCAGGGACACCACCAGCCGGAGACCGGCGCGGCCCGGTCAAGTGGGTGCTCGGAAATCGGCCCAAGACGGGGCTTGGGCGCGTGGCGCTACAACCAGAAGTGGTGCCGCTGGGCGTGGTGCTAAGGCCGGTGCTACCGGTAGGGTTAACTCCGGGACTCGAGCTTCGACTACCGGAAAGAAGGGTGGCGCTGCTTCTGGAAAGGCTAGCAAGACGGATGCCGCTGCTGCAGCTAATGGCGATGCTGAAGATGGTAAGTCAAAGAAGCCTCAATATGAAGGTCCTGATCCAGAATTGGCTGCAATGCTTGAAAGGGACGTGTTAGAAACCTCTCCTGGAGTTAGATGGGATGATGTTGCAGGGCTTACTGAAGCAAAAAGGCTTCTAGAAGAAGCTGTCGTTCTTCCTTTGTGGATGCCTGAATATTTCCAGGGAATCAGGAGACCGTGGAAAGGTGTTCTCATGTTTGGACCTCCAGGAACTGGGAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGTGGGACCACTTTCTTTAATGTATCTTCTGCTACTTTAGCTTCTAAATGGCGTGGGGAGAGTGAGCGCATGGTGAGGTGTTTGTTTGATCTTGCAAGAGCATATGCACCAAGCACAATATTCATTGATGAAATTGATTCTCTATGCAATTCTAGGGGGGCTTCTGGTGAGCATGAATCGTCCAGAAGGGTGAAGTCTGAACTTCTAGTTCAGGTTGATGGTGTAAGCAATAGTGCCACAAATGAAGATGGTAGCCGTAAAATAGTAATGGTTTTGGCAGCTACTAACTTCCCTTGGGATATTGATGAGGCACTAAGGAGAAGGCTGGAAAAGCGTATATATATCCCTCTTCCAAATTTTGAGAGTCGTAAAGAGCTGATCCGAATCAATTTGAAGACTGTTGAGGCAAGTTGTGCTGTGGCACCTGATGTCAATATAGACGAAGTGGCTCGCCGGACAGAGGGATATAGTGGAGATGATTTGACAAATGTCTGTCGCGATGCTTCCTTGAATGGTATGAGGCGCAAGATAGCAGGAAAGACTCGTGATGAAATCAAGAACATGTCCAAGGATGAGATTTCAAAGGATCCTGTTGCCATGTGTGATTTTGAAGAAGCTTTGGGAAAGGTCCAACGAAGTGTTTCTCAGGCTGACATTGAACGCCATGAGAAGTGGTTTACCGAGTTTGGATCAGCATAA 1602 0.4938 MVGGSLAGLQEHLKLARDYALEGLYDTSIIFFDGALAQINKHLSTVQDPLIRAKWMNVKKSLSEETEVVKQLDAERRAFKDNPIGRRPASPPISVKSSSSFVFQPLDEYPTSSSGSGPVDDPDVWRPPSRDTTSRRPARPGQVGARKSAQDGAWARGATTRSGAAGRGAKAGATGRVNSGTRASTTGKKGGAASGKASKTDAAAAANGDAEDGKSKKPQYEGPDPELAAMLERDVLETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELLVQVDGVSNSATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEASCAVAPDVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDEISKDPVAMCDFEEALGKVQRSVSQADIERHEKWFTEFGSA 533
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00319 533 Pfam AAA+ lid domain 444 485 IPR041569 -
Gma07g00319 533 MobiDBLite consensus disorder prediction 106 224 - -
Gma07g00319 533 MobiDBLite consensus disorder prediction 210 224 - -
Gma07g00319 533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 232 519 IPR027417 -
Gma07g00319 533 ProSitePatterns AAA-protein family signature. 390 409 IPR003960 GO:0005524|GO:0016887
Gma07g00319 533 Gene3D - 239 524 IPR027417 -
Gma07g00319 533 Gene3D - 4 80 - -
Gma07g00319 533 CDD AAA 275 418 - -
Gma07g00319 533 Pfam ATPase family associated with various cellular activities (AAA) 281 418 IPR003959 GO:0005524|GO:0016887
Gma07g00319 533 PANTHER AAA DOMAIN-CONTAINING 4 533 - -
Gma07g00319 533 SMART AAA_5 277 420 IPR003593 -
Gma07g00319 533 MobiDBLite consensus disorder prediction 79 98 - -
Gma07g00319 533 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 4 533 - -
Gma07g00319 533 Coils Coil 62 82 - -
Gma07g00319 533 Pfam Vps4 C terminal oligomerisation domain 486 531 IPR015415 -
Gma07g00319 533 Hamap Meiotic spindle formation protein mei-1 [mei-1]. 7 533 IPR028596 GO:0008017|GO:0008568|GO:0051013
Gma07g00319 533 Gene3D - 419 509 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma07g00319 Gma-Chr7 2708291 2712312 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00319 233 525 Calmodulin-binding Proteins AT3G56690 39.735 7.30e-49 179
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00319 K07767 - gmx:100787634 932.554
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00319 07 2708291 2712312 Gma07g00319 07 2708291 2712312 ECH
Gma07g00319 07 2708291 2712312 Gma08g01905 08 17155805 17159947 GST
Gma13g03234 13 46411832 46413681 Gma07g00319 07 2708291 2712312 PCT
Gma15g00121 15 991961 995309 Gma07g00319 07 2708291 2712312 PCT
Gma07g00319 07 2708291 2712312 Gma13g03234 13 46411832 46413681 PCT
Gma07g00319 07 2708291 2712312 Gma15g00121 15 991961 995309 PCT