Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00291 ATGGTGCAATCAAGGAAATTCAGAGGTGTGAGGCAACGCAATTGGGGCTCTTGGGTTTCTGAGATTCGTCACCCATTATTGAAAAGGAGGGTGTGGCTTGGGACATTCGAGACAGCTGATGAAGCAGCTAGAGCATATGATGAGGCCGCCATTTTGATGAGTGGAAGAAATGCCAAAACAAACTTCCCAGTTGGTGAAAACCAAATGGGAAATCATAGTTCAAGTACTTCATCTTCCTCCACCACTACATTGTCTGCAGTTCTGAGTGCAAAACTTAGGAAGTGTTGCAAGTCCCCTTCACCTTCCCTCACTTGCCTGAGGCTTGACACTGAGAATTCCCACATTGGTGTGTGGCAGAAGCGAGCAGGCCCTCGTTCTGACTCAAACTGGATCATGATGGTTGAGTTGGAAAAGAAGAACAACAAGGGTCCTTCTTCTGAATCCGAATTGCCTGTTGTTGTTGTTGATGATGATGCCCCAGAGAAGGTAAAGCCTGAGGAAAGCACTGGCTTAGATGAGGAACAGAAAATGGCCCTACAGATGATAGAGGAACTTCTGAATAGgaattga 570 0.4579 MVQSRKFRGVRQRNWGSWVSEIRHPLLKRRVWLGTFETADEAARAYDEAAILMSGRNAKTNFPVGENQMGNHSSSTSSSSTTTLSAVLSAKLRKCCKSPSPSLTCLRLDTENSHIGVWQKRAGPRSDSNWIMMVELEKKNNKGPSSESELPVVVVDDDAPEKVKPEESTGLDEEQKMALQMIEELLNRN 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00291 189 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Gma07g00291 189 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Gma07g00291 189 MobiDBLite consensus disorder prediction 155 173 - -
Gma07g00291 189 MobiDBLite consensus disorder prediction 139 173 - -
Gma07g00291 189 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Gma07g00291 189 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Gma07g00291 189 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Gma07g00291 189 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WIN1-LIKE 1 189 - -
Gma07g00291 189 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Gma07g00291 189 CDD AP2 6 64 IPR001471 GO:0003700|GO:0006355
Gma07g00291 189 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 189 - -
Gma07g00291 189 Gene3D AP2/ERF domain 5 64 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00291 Gma-Chr7 2518998 2520009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00291 1 189 AP2-EREBP Transcription Factor Family AT1G15360 62.927 4.11e-80 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma07g00291 AP2 3.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00291 - - gmx:100796962 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00291 07 2518998 2520009 Gma07g00291 07 2518998 2520009 ECH
Gma07g00291 07 2518998 2520009 Gma08g01938 08 17390850 17392015 GST