Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00276 ATGGCTTTTTGGTTTTGTTGCGGAAAAGCTTCGAATCGCAGAAGGCGAGGGAAAGAACAACATAAATGGCTGGTGTTTTCTTTGAAGGAAAAACGCTCTGCTACAAATAATTTCTACTATGATAACAAGCTTGGAGAAGGGGGAATCGACAGTGTGTACTACTGGGGCCAACTTTGGAATTGGTCGCAAATTAAAATTGATTTGACATCCATGCCATCTAAGTATTACGCTTCACAGAGTCAGCTTGTGAGGGATCTGTATCAAAACAGTTACTTCGATTTTCTGATGCAACAATCCTTCAACATGATGAAAAGATTGGAAGTTTGGAGCAACAAAGTAGAGATGGAATTTACTGTTGAACTTGAAATATTTGCAAGAATTCGTCACAAGAATCTTCTCAGTTTTCGTGGCTACTGTGCTGAAGGACATGAACGATTAATTGCATATGGAGATTGGAAGTTTGGAGCAACAAAATACCTTCACCACCAAGCAACACCTCATATCATCCATAGGGACATCAAAGCAAACAACGTGTATCTGGATTCTGATTTCCAGGCCCGAATTGGTGGTTTCCGATTTGCTAAGTTGATCCCTGACGGAGCAATACATGTGAGTACAGAAGTTAAGGGTACCCTGAGCTACCTTGCACCAGAATATGCTATGTTAGGTAAAGCAAATGAGGGTTGTGATGTCTATAGTTTTGGCATTCTCTTTCTAGAACTTGCCAGTGGCAGAAGACCGGTTGAAAAGCTTAGTTCCACGGTGAAGCAAGCAATGGTTGATTTGGCGTTGCCATTGGTTTGTGAGAAGAAATTTAGTGAACTTGCTTATCCGAGACTAAATGGTAACTATGTGGAGGAGGAGCTTAAAAGAGTTGTTTTTGTTGCACTTATATGTGCTCAGGTTCTACCTGGGAAGAGACCAACCATGCTTGATGTGGTAGAGAGAAAGGAAGAGGTGGGGCTGATTGGTGGAAAGGTTATGGCTTTTTGGTTTTGTTGCGGAAAAGTTTCCACTCGCAGAAGACGAGGGAAAGAACAACCTAAATGGCGGGTGTTTTCTTTGAAGGAATTACACTCTGCCACAAATAATTTCAACTATGATAACAAGCTTGGAGAAGGTAGCTTCGGCAGTGTGTACTGGGGCCAACTTTGGGATGGATCACAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAGAGCAGAGACTGAATTTACTGTTGAACTTGAAATATTGGCAAGAATACGACACAAGAATCTTCTCAGTCTTCGTGGCTACTGTGCTGAAGGACAGGAACGGTTAATTGTATATGAATATATGCAAAATTTGAGCCTCCACTCTCATCTTCATGGACATCACTCATTCGAATGCCTTCTTGATTGGAATCGGCGGATGAACATTGCAATTGGTTCTGCTGAAGGAATTGTGTATCTTCATCACCAAGCAACACCGCATATCATCCACAGAGATATTAAAGCAAGCAACGTGTTGCTGGATTCTGATTTCCGTGCCCGGGTTGCTGATTTCGGGTTTGCTAAGTTGATGCCTGACGGGGCAACGCATATGACTACAAAAGTAAAGGGTACCCTGGGCTACCTTGCACCAGAATATGCTATGTTAGGCAAAGCAAATGAGAGTTGTGATGTCTACAGTTTTGGCATTCTCCTTCTGGAACTCACCAGTGGCAAGAGACCAATTGAAAAGCTTAATTCCACAGTGAGGCGATCTATAGTTGATTGGGCATTGCATTTGGTTTGTGAGAAGAAATTTAGTGAAATTGCTGATCCAAGACTAAATGGCAACTATGTGGAGGGAGAGCTTAAAAGAGTTGTTTTAGTTGCACTTATGTGTGCTCAGGATCTACCTGAGAAGAGACCCACCATACTTGATGTGATAGAGCTACTGAAGGGAGAATCTAAAGATAAATTTTATCATATAGAGAACAGTGAAATGTTCAGAAGCCTTCTAGCTGTAGAAAGCAATGATGAGACATCAGTGGCTGAAGACAGTTTAGACTATATATCAGAAGAAAAAGAATTACAACGTCCCTTGAAAGGGAATAATTAA 2070 0.414 MAFWFCCGKASNRRRRGKEQHKWLVFSLKEKRSATNNFYYDNKLGEGGIDSVYYWGQLWNWSQIKIDLTSMPSKYYASQSQLVRDLYQNSYFDFLMQQSFNMMKRLEVWSNKVEMEFTVELEIFARIRHKNLLSFRGYCAEGHERLIAYGDWKFGATKYLHHQATPHIIHRDIKANNVYLDSDFQARIGGFRFAKLIPDGAIHVSTEVKGTLSYLAPEYAMLGKANEGCDVYSFGILFLELASGRRPVEKLSSTVKQAMVDLALPLVCEKKFSELAYPRLNGNYVEEELKRVVFVALICAQVLPGKRPTMLDVVERKEEVGLIGGKVMAFWFCCGKVSTRRRRGKEQPKWRVFSLKELHSATNNFNYDNKLGEGSFGSVYWGQLWDGSQIAVKRLKVWSNRAETEFTVELEILARIRHKNLLSLRGYCAEGQERLIVYEYMQNLSLHSHLHGHHSFECLLDWNRRMNIAIGSAEGIVYLHHQATPHIIHRDIKASNVLLDSDFRARVADFGFAKLMPDGATHMTTKVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELTSGKRPIEKLNSTVRRSIVDWALHLVCEKKFSEIADPRLNGNYVEGELKRVVLVALMCAQDLPEKRPTILDVIELLKGESKDKFYHIENSEMFRSLLAVESNDETSVAEDSLDYISEEKELQRPLKGNN 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00276 689 ProSiteProfiles Protein kinase domain profile. 38 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00276 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Gma07g00276 689 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Gma07g00276 689 Gene3D Transferase(Phosphotransferase) domain 1 441 653 - -
Gma07g00276 689 Gene3D Transferase(Phosphotransferase) domain 1 154 322 - -
Gma07g00276 689 ProSiteProfiles Protein kinase domain profile. 365 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00276 689 SUPERFAMILY Protein kinase-like (PK-like) 347 636 IPR011009 -
Gma07g00276 689 PANTHER - 84 149 - -
Gma07g00276 689 SUPERFAMILY Protein kinase-like (PK-like) 20 317 IPR011009 -
Gma07g00276 689 Gene3D Phosphorylase Kinase; domain 1 9 150 - -
Gma07g00276 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Gma07g00276 689 PANTHER - 330 663 - -
Gma07g00276 689 PANTHER - 158 315 - -
Gma07g00276 689 PANTHER OS01G0253100 PROTEIN 4 67 IPR045271 GO:0004714|GO:0006468
Gma07g00276 689 Gene3D Phosphorylase Kinase; domain 1 335 440 - -
Gma07g00276 689 SMART serkin_6 365 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00276 689 PANTHER OS01G0253100 PROTEIN 84 149 IPR045271 GO:0004714|GO:0006468
Gma07g00276 689 Pfam Protein kinase domain 366 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00276 689 Pfam Protein kinase domain 156 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00276 689 PANTHER OS01G0253100 PROTEIN 330 663 IPR045271 GO:0004714|GO:0006468
Gma07g00276 689 PANTHER OS01G0253100 PROTEIN 158 315 IPR045271 GO:0004714|GO:0006468
Gma07g00276 689 PANTHER - 4 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00276 Gma-Chr7 2405946 2415824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00276 352 632 Trihelix Transcription Factor Family AT1G68690 47.719 1.78e-84 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Gma07g00276 Pkinase 3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00276 - - gmx:100814204 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00276 07 2405946 2415824 Gma07g00276 07 2405946 2415824 ECH
Gma07g00276 07 2405946 2415824 Gma08g01954 08 17509024 17512376 GST
Gma13g03279 13 46756237 46759243 Gma07g00276 07 2405946 2415824 PCT
Gma15g00072 15 606823 609230 Gma07g00276 07 2405946 2415824 PCT
Gma07g00276 07 2405946 2415824 Gma13g03279 13 46756237 46759243 PCT
Gma07g00276 07 2405946 2415824 Gma15g00072 15 606823 609230 PCT