Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00252 ATGGAGGAGTCATGGGAAAATTGGCATCTTCATATGGAAACCGGTTGCGAGAACGATTTCTTAGGCAAGTGTCACGGCACTGACGATGACGAGTTCTTCAGAGACATCCTTCAGCAACCACCACCTGCGGCTTTCTCTTCCGAAAGCGAAAGCGATCACTCCTTCCTCGCTGTCCAAAACACTTCTAGCATCCCCAACGACGGTGCCGTTTTGTCTCCTAGGAATTACCTCGTCAAAAGCAGCAGCTCCAACTCCTTGGTCTCTCAAAACGCTTCCAAACGACCTCGTCGTTTGTCCTCTCCCAGGACTTACATTCTGTCCTTCGACAACTCAACCATGGTTCCGGCCACACCCGAAACCCGCCCCCGCTCCTCCAATAATTCCCCTCTGCCTGCCAAACGGGCCCTGGAAAGCCCAGGCCCAGTAGCCCGAAGGCCCAACCAAGGAGCTAAGAAGATAAGAACCTCTTCTCAGACCATCGATCACATAATGGCCGAGAGACGACGGAGGCAGGAACTCACGGAGAGGTTCATAGCACTCTCAGCCACGATTCCCGGCTTGAACAAGACGGACAAGGCTTCTGTACTTCGAGCAGCAATTGATTACGTGAAACAACTTCAAGAAAGGGTACAGGAACTGGAGAAACAAGACAAAAAAAGGAGTACAGAGTCAGTAATATTCATCAAGAAACCCGACCCAAATGGAAACGATGAAGACACCACCTCCACTGAAACGAACTGTAGCATCCTTCCTGAGATGGAAGCAAGGGTGATGGGGAAGGAGGTGCTCATTGAGATCCACTGTGAGAAAGAAAATGGTGTTGAGCTAAAAATATTGGACCACCTTGAAAATCTTCATCTCAGTGTTACCGGAAGCAGTGTCTTGCCATTTGGAAATTCTGCTCTCTGCATTACCATCACAACTCAGATGGGTGACGGGTACCAAATGACTGTGAATGATCTAGTGAAAAACCTTAGACAATTGTTCTCAAAATCACATGTGCTAAGCGACAGCGATCCGTACTAG 1026 0.4893 MEESWENWHLHMETGCENDFLGKCHGTDDDEFFRDILQQPPPAAFSSESESDHSFLAVQNTSSIPNDGAVLSPRNYLVKSSSSNSLVSQNASKRPRRLSSPRTYILSFDNSTMVPATPETRPRSSNNSPLPAKRALESPGPVARRPNQGAKKIRTSSQTIDHIMAERRRRQELTERFIALSATIPGLNKTDKASVLRAAIDYVKQLQERVQELEKQDKKRSTESVIFIKKPDPNGNDEDTTSTETNCSILPEMEARVMGKEVLIEIHCEKENGVELKILDHLENLHLSVTGSSVLPFGNSALCITITTQMGDGYQMTVNDLVKNLRQLFSKSHVLSDSDPY 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00252 341 MobiDBLite consensus disorder prediction 214 237 - -
Gma07g00252 341 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 335 - -
Gma07g00252 341 MobiDBLite consensus disorder prediction 214 243 - -
Gma07g00252 341 SMART finulus 163 212 IPR011598 GO:0046983
Gma07g00252 341 Pfam Helix-loop-helix DNA-binding domain 162 207 IPR011598 GO:0046983
Gma07g00252 341 PANTHER BHLH TRANSCRIPTION FACTOR 1 335 - -
Gma07g00252 341 MobiDBLite consensus disorder prediction 81 132 - -
Gma07g00252 341 Gene3D - 155 226 IPR036638 GO:0046983
Gma07g00252 341 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 156 218 IPR036638 GO:0046983
Gma07g00252 341 MobiDBLite consensus disorder prediction 81 157 - -
Gma07g00252 341 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 157 206 IPR011598 GO:0046983
Gma07g00252 341 Coils Coil 196 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00252 Gma-Chr7 2182897 2186203 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00252 97 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.213 1.42e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma07g00252 HLH 7.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00252 - - gmx:100778376 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03304 13 46992662 46997680 Gma07g00252 07 2182897 2186203 PCT