Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00251 ATGGGGGAGCCATGCCAACAATATTGGTTTTCGGATATGGAAATACGAGATTTTGATTTCTTTAACCAAAGCCAGAACCACAAGATTGGATCACTCGATCGTGATGAGGATCGGATCTTTCGAGAGATCATGATGCATCAACCAGTTTTCTCTTCTGACAGCGATACTCACTCTCCCAAAATTCTAAGCAAATCAATCCACGGTGGTGATAGTGGTTATAATACTTACACAGCCCTTGCCAACAACAAGAGTAGCAATAGCAACCTAGTGATGAAGAGCAACAGCTCCAACTTCATCTTCTCATCACAACATGCACCACCAGAGAAACCTTCCACAGCCACAGTCGCTTCCCCAACCGCATACATTCTTTCATTCGGCGACTCCACCCTAGTGGCAGCTACACGCCAAAACTACGGTGGAAAACAGCCCTACCACGAGGAAGTGGTAGTAGGGAGTGGTGGCGTATGTCTTCCCTCAAAAGGGGTCTCAGAAAAACATGATGTTGAACCTACTACGGCCAACCAAACAACAAAGAGAAGTAGAAGCTCTGCGGAGACACTAGACCATATAATGACAGAGAGAAAAAGAAGACGGGAACTGACTGAGAGATTCATTGCACTTTCAGCCACCATACCTGGCTTAAAGAAGATTGACAAGGCCACTATACTCAGTGAAGCAATCACTCATGTGAAAAGACTTAAAGAACGTGTAAGGGAGCTCGAAGAACAGTGTAAGAGGACAAAGGTAGAGTCAGTGTCATTCGTTCATCAGAGACCCCACATTACAACTGATAAAGGCACCACCTCTGGTGCAATGAACTCTGATGAATGGTGTAGAACCAATGAAGCACTCCCTACGGTGGAAGCAAGAGTGTTTAAAAAAGATGTACTCCTCCGGATTCACTGCAAGATACAAAGTGGCATTTTGATCAAAATTTTGGATCATCTTAATAGTCTTGATCTCTCCACAATCAGCAACAGTGTAATGCCTTTTGGAAGTTCAACTCTTGATATCAGCATTATTGCTCAGATGGGGGACAAATTCAAAGTAACAATGAACGATCTAGTGAAAAATCTGAGACTGGCTCTCTTGCAGTCATCTGAAGTACAATAA 1113 0.4358 MGEPCQQYWFSDMEIRDFDFFNQSQNHKIGSLDRDEDRIFREIMMHQPVFSSDSDTHSPKILSKSIHGGDSGYNTYTALANNKSSNSNLVMKSNSSNFIFSSQHAPPEKPSTATVASPTAYILSFGDSTLVAATRQNYGGKQPYHEEVVVGSGGVCLPSKGVSEKHDVEPTTANQTTKRSRSSAETLDHIMTERKRRRELTERFIALSATIPGLKKIDKATILSEAITHVKRLKERVRELEEQCKRTKVESVSFVHQRPHITTDKGTTSGAMNSDEWCRTNEALPTVEARVFKKDVLLRIHCKIQSGILIKILDHLNSLDLSTISNSVMPFGSSTLDISIIAQMGDKFKVTMNDLVKNLRLALLQSSEVQ 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00251 370 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 258 IPR036638 GO:0046983
Gma07g00251 370 Coils Coil 223 250 - -
Gma07g00251 370 MobiDBLite consensus disorder prediction 160 186 - -
Gma07g00251 370 Pfam Helix-loop-helix DNA-binding domain 189 233 IPR011598 GO:0046983
Gma07g00251 370 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 184 233 IPR011598 GO:0046983
Gma07g00251 370 PANTHER BHLH TRANSCRIPTION FACTOR 7 365 - -
Gma07g00251 370 PANTHER TRANSCRIPTION FACTOR NAI1 7 365 - -
Gma07g00251 370 SMART finulus 190 239 IPR011598 GO:0046983
Gma07g00251 370 Gene3D - 172 250 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00251 Gma-Chr7 2171187 2173894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00251 81 363 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.301 7.73e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma07g00251 HLH 2.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00251 - - gmx:100777846 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00251 07 2171187 2173894 Gma08g01979 08 17788340 17791284 GST