Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00250 ATGAACGGCGAACTCTTCTTACACGCGCCCACCACCACCACCACTAACTTTTTGCTTCCAAAAAAATCCCAAACGGCGTCGTCGGAGACACTGGACCCATCACAGAAGCTACGACGCTACGAAACGGCGCTGGAAGGAATCGCCGCGGTCGTGGGAGAACACGTCCTCTTCGGAACCACGTTGTCGCATGTTTCTGAGACTCCGAAGAAGACAAATGGCGTGTCGTCATCGTTGAGCAAGAGCTACAGAGGAGTAAGGAAGCGACCGTGGGGGAGGTGGTCGGCGGAGATACGCGACCGCATCGGGCGGTGCCGCCACTGGCTGGGGACTTTCGACACGGCGGAGGAGGCGGCGCGTGCGTACGACGCGGCGGCGAGGCGCATGAGAGGCGCGAAGGCGAGGACCAACTTCAAGATACCCTCGGTGTTGCCACTTTCTCCGGAAGGGGTTCATGGTAGTGCCGTGAAGCCGAAAACCGCGCGAAGCAACGCTAGGAAGTGTTCTTCCGTGGAACAATTGTTCAGTGGGGTGCCTCAACTTCGAAAAGATGATGGTATCGGCGAGAATGGGAATGTGGAGGTCGATTTGAAGCTGGGTGTGAACTTTGGTGTTACGAGCTCTAGAATGGTGCTTTAG 636 0.5708 MNGELFLHAPTTTTTNFLLPKKSQTASSETLDPSQKLRRYETALEGIAAVVGEHVLFGTTLSHVSETPKKTNGVSSSLSKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRMRGAKARTNFKIPSVLPLSPEGVHGSAVKPKTARSNARKCSSVEQLFSGVPQLRKDDGIGENGNVEVDLKLGVNFGVTSSRMVL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00250 211 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF084 37 196 - -
Gma07g00250 211 SUPERFAMILY DNA-binding domain 81 138 IPR016177 GO:0003677
Gma07g00250 211 Gene3D AP2/ERF domain 80 139 IPR036955 GO:0003700|GO:0006355
Gma07g00250 211 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 37 196 - -
Gma07g00250 211 SMART rav1_2 81 144 IPR001471 GO:0003700|GO:0006355
Gma07g00250 211 CDD AP2 80 139 IPR001471 GO:0003700|GO:0006355
Gma07g00250 211 Coils Coil 114 134 - -
Gma07g00250 211 Pfam AP2 domain 81 130 IPR001471 GO:0003700|GO:0006355
Gma07g00250 211 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
Gma07g00250 211 PRINTS Ethylene responsive element binding protein signature 104 120 IPR001471 GO:0003700|GO:0006355
Gma07g00250 211 ProSiteProfiles AP2/ERF domain profile. 81 138 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00250 Gma-Chr7 2158709 2159344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00250 45 144 AP2-EREBP Transcription Factor Family AT1G80580 66.667 8.48e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma07g00250 AP2 1.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00250 - - gmx:102660200 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00250 07 2158709 2159344 Gma07g00250 07 2158709 2159344 ECH
Gma07g00250 07 2158709 2159344 Gma08g01982 08 17826614 17827213 GST