Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00241 ATGGATAATCTCGAAAAACTGAAGAATGAAAATCTCGATCTCGAGAAAATACCTTTGGAGCAAGTCTTCCAACAGTTGAACTGTTCGGAGGAGGGTCTCACAACTGAGGAAGGCCGAAAGAGGTTGCAACTTTTTGGGCCCAACAACTTTGCCAAACTATTCTGCAAACAGGAAAGTAAGCTGCTGAAATTCTTGGGGTTTATGTGGAATCCTCTGTCATGGGTCATGGAAGCGGCTGCTATCATGGCGATTGCATTGGCCAATGGAGGGGGCAGGCCACCAGATTGGCAGGACTTCGTGGGAATACTAGCATTGCTTGTTATCAACTCCACCATTAGTTTTATTGAAGAAAATAATGCCGGCAATGCTGCTGCTGCACTTATGGCAGGTCTTGCTCCGAAAACTAAGGTTCTAAGGGACGGAAAGTGGACCGAGGAGGATGCTGCTATATTGGTACCAGGAGACATTATCAGCATCAAGTTAGGAGACATCGTCCCAGCTGATGCTCGTCTCTTGGATGGTGATCCACTCAAGATTGATCAATCTGCACTTACTGGCGAATCATTGCCTGTTTCAAAGAATCCAGGTGATGAAGTCTTCTCCGGGTCTACAGTTAAGCAAGGAGAGCTTGAGGCTGTTGTAATCGCTACTGGGGTACACACCTTTTTTGGTAAGGCTGCTCACTTGGTGGACAGCACTAACCAAGAAGGGCATTTTCAGAAGGTATTAACAGCCATTGGTAACTTCTGCATTTGCTCAATAGCTGTGGGTATGGTCATAGAGATCATTGTCATGTACCCAATTCAGCACCGACCTTATAGGAGTGGAATTGACAATCTCTTGGTGCTGCTCATTGGAGGGATTCCTATTGCCATGCCAACGGTTTTGTCAGTGACTATGGCTATTGGTTCTCATCGGCTGTCCCAACAAGGTGCTATCACTAAGAGGATGACAGCCATTGAGGAGATGGCTGGGATGGATGTTTTATGCAGTGACAAGACTGGCACTCTAACTCTGAACAAGCTCACTGTAGACAAGACTTTGATTGAGGTTTTTGCAAAAGATGCCGACAAAGACACTGTAATTTTACTTGCAGCTAGAGCGTCTAGGGTAGAGAATCAAGATGCTATTGATGCTTGCATTGTTGGAATGTTGGGTGACCCAAAGGAGGCCAGAGATGGCATCAAAGAGGTCCATTTCTTACCCTTTAATCCAGTGGACAAGCGTACGGCCATCACATATATAGACAACAATGGCAATTGGAACCGAGCAAGCAAAGGGGCACCAGAGCAGATTATACATCTCTGCAATCTCCGGGAAGATGTGAAGAAGAAAGCTCATGCTATTATTGGAAAATTTGCTGATCGGGGTCTTCGTTCCCTTGCTGTTGCCAAGCAAGAAGTTCCAGAGAAGACCAAGGAGAGTCCAGGAGGACCATGGCAGTTTGTGGGTCTCTTGCCTCTCTTTGACCCTCCTAGGCATGACAGTGCAGAGACCATTCGCCGTGCTCTCCATCTTGGAGTGAACGTTAAGATGATTACAGGCGATCAGCTAGCTATTGGAAAGGAGACTGCTCGCAGGCTTGGCATGGGAAGTAACATGTACCCTTCTTCCTCCCTCCTTGGCGATCACAAGGATGAGTCTATTGCTGCACTTCCAGTTGATGAGCTTATTGAAAAGGCTGATGGCTTTGCTGGTGTCTTTCCTGAGCACAAATATGAGATTGTGAAGATACTCCAGGATAGAAAGCATATATGTGGGATGACTGGAGATGGTGTCAATGATGCTCCTGCCCTAAAAAAGGCAGACATTGGGATTGCAGTGGCTGATGCAACCGATGCAGCTCGAGGTGCATCAGACATAGTTCTTACAGAGCCTGGTCTGAGTGTGATTGTGAGTGCAGTTTTGACAAGCAGAGCCATTTTCCAGAGAATGAAGAACTACACCATCTATGCTGTTTCTATCACAATCCGAATCGTGCTGGGCTTTATGCTGCTAGCTCTTATCTGGAAATTTGATTTCTCACCTTTTATGGTTTTGATCATTGCAATACTAAATGACGGAACAATTATGACCATTTCCAAGGACAGAGTGAAGCCATCACCTCTGCCAGATTCATGGAAGTTGAATGAGATTTTTGCCACAGGCATAGTGCTTGGTGCCTACCTTGCTATAATGACTGTTGTCTTCTTCTGGGCTGCTCATGCTTCTGATTTCTTCACGGAAAAATTTGGTGTCAGACCTATCAGGAATGTCCAGGATGAGCTCACAGCGGCTGTTTACCTTCAAGTGAGTATTGTAAGTCAGGCTCTCATCTTTGTTACTCGGTCAAGGAACTTCTCTTTTCTTGAGCGCCCTGGTCTCTTGCTTGTTACAGCCTTTATAATAGCACAGCTGATTGCCACACTCATAGCTGTTTATGCAAACTGGGGCTTTGCAAGGATGAGAGGTATTGGGTGGGGCTGGGCTGGTGTCATTTGGCTTTACAGCATCATTTTCTACATTCCGTTGGATTTTCTTAAATTCGGCATTCGATATTTTTTGAGTGGCAAGGCATGGAATAATATTACCGAGAACAAGACTGCTTTCACAACAAAGAAGGATTATGGAAAGGAAGAGCGAGAAGCACAATGGGCCACAGCTCAACGCACCCTACATGGGTTGAATCCTCCAGAAACAGAACAGATATTTAGTGAAAAGAACAACTACCGCGAATTATCTGAAATCGCAGATCAGGCTAGGAAACGAGCAGAAGTTGCAAGATTGCGGGAGCTTCACACATTGAAGGGACATGTCGAATCCGTCGTGAAACTCAAGGGACTGGACATTGATACAATTCAGCAGCATTACACTGTTTGA 2859 0.4558 MDNLEKLKNENLDLEKIPLEQVFQQLNCSEEGLTTEEGRKRLQLFGPNNFAKLFCKQESKLLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGILALLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWTEEDAAILVPGDIISIKLGDIVPADARLLDGDPLKIDQSALTGESLPVSKNPGDEVFSGSTVKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAIGNFCICSIAVGMVIEIIVMYPIQHRPYRSGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFAKDADKDTVILLAARASRVENQDAIDACIVGMLGDPKEARDGIKEVHFLPFNPVDKRTAITYIDNNGNWNRASKGAPEQIIHLCNLREDVKKKAHAIIGKFADRGLRSLAVAKQEVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETARRLGMGSNMYPSSSLLGDHKDESIAALPVDELIEKADGFAGVFPEHKYEIVKILQDRKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGIVLGAYLAIMTVVFFWAAHASDFFTEKFGVRPIRNVQDELTAAVYLQVSIVSQALIFVTRSRNFSFLERPGLLLVTAFIIAQLIATLIAVYANWGFARMRGIGWGWAGVIWLYSIIFYIPLDFLKFGIRYFLSGKAWNNITENKTAFTTKKDYGKEEREAQWATAQRTLHGLNPPETEQIFSEKNNYRELSEIADQARKRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00241 952 Gene3D - 342 489 IPR023299 GO:0000166
Gma07g00241 952 Gene3D - 327 626 IPR023214 -
Gma07g00241 952 Gene3D - 95 816 - -
Gma07g00241 952 Pfam E1-E2 ATPase 132 309 - -
Gma07g00241 952 PANTHER CALCIUM-TRANSPORTING ATPASE 3 932 - -
Gma07g00241 952 SUPERFAMILY HAD-like 326 636 IPR036412 -
Gma07g00241 952 SFLD Haloacid Dehalogenase 312 641 - -
Gma07g00241 952 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 564 674 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma07g00241 952 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 102 364 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma07g00241 952 Pfam haloacid dehalogenase-like hydrolase 326 603 - -
Gma07g00241 952 Gene3D - 133 217 - -
Gma07g00241 952 SUPERFAMILY Calcium ATPase, transduction domain A 133 230 IPR008250 -
Gma07g00241 952 SUPERFAMILY Calcium ATPase, transmembrane domain M 12 849 IPR023298 -
Gma07g00241 952 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 32 807 IPR006534 GO:0008553|GO:0016021|GO:0120029
Gma07g00241 952 Coils Coil 903 923 - -
Gma07g00241 952 CDD P-type_ATPase_H 32 842 IPR006534 GO:0008553|GO:0016021|GO:0120029
Gma07g00241 952 SMART Cation_ATPase_N_a_2 13 88 IPR004014 -
Gma07g00241 952 PRINTS H+-transporting ATPase (proton pump) signature 446 464 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma07g00241 952 PRINTS H+-transporting ATPase (proton pump) signature 620 645 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma07g00241 952 PRINTS H+-transporting ATPase (proton pump) signature 589 605 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma07g00241 952 PRINTS H+-transporting ATPase (proton pump) signature 561 577 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma07g00241 952 PRINTS H+-transporting ATPase (proton pump) signature 761 782 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma07g00241 952 PANTHER ATPASE 9, PLASMA MEMBRANE-TYPE 3 932 - -
Gma07g00241 952 Pfam Cation transporter/ATPase, N-terminus 16 82 IPR004014 -
Gma07g00241 952 ProSitePatterns E1-E2 ATPases phosphorylation site. 332 338 IPR018303 -
Gma07g00241 952 SFLD p-type atpase 312 641 IPR044492 -
Gma07g00241 952 PRINTS P-type cation-transporting ATPase superfamily signature 330 344 - -
Gma07g00241 952 PRINTS P-type cation-transporting ATPase superfamily signature 589 608 - -
Gma07g00241 952 PRINTS P-type cation-transporting ATPase superfamily signature 506 516 - -
Gma07g00241 952 PRINTS P-type cation-transporting ATPase superfamily signature 612 624 - -
Gma07g00241 952 PRINTS P-type cation-transporting ATPase superfamily signature 180 194 - -
Gma07g00241 952 PRINTS P-type cation-transporting ATPase superfamily signature 484 495 - -
Gma07g00241 952 Gene3D - 901 952 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00241 Gma-Chr7 2073287 2079183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00241 5 952 Primary Pumps ATPases AT3G42640 81.962 0.0 1587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00241 K01535 - gmx:100796279 1758.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00241 07 2073287 2079183 Gma08g01988 08 17873193 17879032 GST