Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00221 ATGGATTGTTCATCATGGATTAACACTTCCTTGGATCTCAACATTAATCCCCGCAGAGTTCATGAAGAAGTTCCCAAGGAGGTAGAAAGCGAGCTTTTCTCTTTGGGAATGACCAAGTTTAACGTGGAAGAAGAGTCTACTAGTGACTTGGAGGAGGAACTGAAGCGGGTGACTGCAGAAAACAAGAAGTTGGCCGAAATGCTCTCAGTGGTGTGTGAGAACTACAACACTTTGAGAAACCATTTGATGGAATGCATGAGGAAAAATGGTGAAAAGGAGGTCAGCCCAACATCAAAGAAAAGAAAGTCTGAAAGCAGCAACAACAATAGTAATTTGATGGGAACTAACAATGGAAACTCAGAGAGCAGTTCTACTGATGAAGAATCTTGCAAGAAACCAAGGGAAGAAATCATCAAAGCAAAAATTTCAAGAGTTTATGTCAGGACTGAAGCATCTGATACTAGCCTTATTGTTAAAGATGGATACCAATGGAGGAAATATGGGCAAAAGGTGACCAGAGATAACCCTTGTCCTAGAGCATATTTCAAGTGCTCTTTTGCTCCTAGCTGCCCTGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTTCTGGTTGCTACTTATGAAGGGGAGCACAATCATCCTCAGTTTTCTTCCCAGATGGAAGCAACATCAGGTTCTGGCCGTAGTGTGACCCTTGGTTCAGTGCCCTGTACCGCATCTCTCAGCACTTCAACACCAACACTTGTTACCCTTGACTTGACAAAATCTCAGGGAAGCAACGATTCCAAGAGCACAAAGCCTAAAGGAGATTCACCTAAAGTACCTCAGAAAATCAAGCTCTGCACCACCCTCTGCCTCATCATGATGGAACGTCATACGATTGAGAATGGTTGTTTATTGAAAGCAAATCCTCGTCAATCTAACACAATTTTGAGTTTCTCTACAGTGTTGCACAAATCTTAA 972 0.4228 MDCSSWINTSLDLNINPRRVHEEVPKEVESELFSLGMTKFNVEEESTSDLEEELKRVTAENKKLAEMLSVVCENYNTLRNHLMECMRKNGEKEVSPTSKKRKSESSNNNSNLMGTNNGNSESSSTDEESCKKPREEIIKAKISRVYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPQFSSQMEATSGSGRSVTLGSVPCTASLSTSTPTLVTLDLTKSQGSNDSKSTKPKGDSPKVPQKIKLCTTLCLIMMERHTIENGCLLKANPRQSNTILSFSTVLHKS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00221 323 Gene3D WRKY domain 141 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma07g00221 323 MobiDBLite consensus disorder prediction 101 124 - -
Gma07g00221 323 MobiDBLite consensus disorder prediction 88 132 - -
Gma07g00221 323 Coils Coil 40 67 - -
Gma07g00221 323 PANTHER TRANSCRIPTION FACTOR 1 281 - -
Gma07g00221 323 SMART WRKY_cls 158 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma07g00221 323 Pfam WRKY DNA -binding domain 159 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma07g00221 323 MobiDBLite consensus disorder prediction 257 277 - -
Gma07g00221 323 ProSiteProfiles WRKY domain profile. 153 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma07g00221 323 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 281 IPR044810 GO:0003700
Gma07g00221 323 SUPERFAMILY WRKY DNA-binding domain 155 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00221 Gma-Chr7 1801744 1806194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00221 4 281 WRKY Transcription Factor Family AT1G80840 51.546 1.24e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma07g00221 WRKY 3.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00221 - - gmx:100807966 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00221 07 1801744 1806194 Gma08g02009 08 18102406 18104951 GST