Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00208 ATGCATGCATTGTCGCTCTTTATAAACTCCTGGGCAAAGGAAAAAAGTAGCCTTTGTTCTGCTTCTTCTTTTCCCTTCCACACAAATACATCACATCATTGCCATTGctctctctctctctctctctctctcgtgcggacacaaTTTTTGATGGGGATATACCTCAGCACTCCCAAAACAGAGAAGGCCTCTGAAGATGGTGAGAACGACAAGCTTCGCTTCGGTTTGTCTTCCATGCAGGGCTGGCGTGCTTCCATGGAAGATGCTCATGCAGCTCATCCATATTTGGACGAGTCTACGTCATACTTTGGTGTTTATGACGGCCATGGAGGCAAAGCAGTTTCAAAATTCTGTGCCAAGTATCTACACCAGCAGGTGCTTAAGAGTGAAGCTTACTTAGCTGGAGATTTAGGCACATCTTTACAGAAATCTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGGGATAAAATAGAAAAGTTGTCTGGTATGCTAGAAGGCTTTATATGGTCTCCCAGGAGTAGTGAAGCCAATGACCGTGTCAATGATTGGGCTTTTGAGGAGGGGCCCCATTCTGATTTTACTGGACCAAACTCTGGAAGCACAGCTTGTGTGGCTGTCATCCGAGGAAACAAACTTGTTGTTGCTAATGCTGGAGATTCTAGATGTGTCTTATCAAGGAAAGGCCAGGCACACAATTTGTCCAAGGACCACAAGCCTGAACTTGAGGCTGAGAAAGACAGGATTCTGAAAGCTGGTGGTTTCATCCAAGTTGGACGGGTCAATGGAAGTTTAAACTTGGCTAGAGCAATTGGTAGAGATATGGAATTCAAGCAGAATAAGTATTTGCCTGTTGAAAAGCAGATTGTAACTGCTGATCCGGACATAACTTCAGTTGAGCTTTGTGATGATGACGAGTTTCTTGTAATAGCTTGTGATGGAATATGGGATTGTATGTCTAGCCAACAGCTTGTGGACTTCATACATCAACAGTTAAAGACTGAGAATAAACTTTCTGCGGTTTGTGAGAAAGTATTTGATAGGTGCTTGGCACCAGCAGCTGGTGGTGAGGGATGTGATAACATGACCATGATCTTGATTCAGTTCAAAAAACCTTCCAACAGCCCAGATGCATCATCTGTCACGAACCAGCCTCAATCGTCTGCTCAACCATCTGAAGCTGATAGAAGTTCAGAGACAATAGAATCGAAATTTCAGGATGTTAATTGTCAATAG 1266 0.4226 MHALSLFINSWAKEKSSLCSASSFPFHTNTSHHCHCSLSLSLSLVRTQFLMGIYLSTPKTEKASEDGENDKLRFGLSSMQGWRASMEDAHAAHPYLDESTSYFGVYDGHGGKAVSKFCAKYLHQQVLKSEAYLAGDLGTSLQKSFLRMDEMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPRSSEANDRVNDWAFEEGPHSDFTGPNSGSTACVAVIRGNKLVVANAGDSRCVLSRKGQAHNLSKDHKPELEAEKDRILKAGGFIQVGRVNGSLNLARAIGRDMEFKQNKYLPVEKQIVTADPDITSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHQQLKTENKLSAVCEKVFDRCLAPAAGGEGCDNMTMILIQFKKPSNSPDASSVTNQPQSSAQPSEADRSSETIESKFQDVNCQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00208 421 MobiDBLite consensus disorder prediction 383 406 - -
Gma07g00208 421 Pfam Protein phosphatase 2C 206 364 IPR001932 -
Gma07g00208 421 Pfam Protein phosphatase 2C 73 153 IPR001932 -
Gma07g00208 421 SMART PP2C_4 63 377 IPR001932 -
Gma07g00208 421 ProSitePatterns PPM-type phosphatase domain signature. 102 110 IPR000222 GO:0043169
Gma07g00208 421 Gene3D - 50 380 IPR036457 -
Gma07g00208 421 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 48 392 - -
Gma07g00208 421 ProSiteProfiles PPM-type phosphatase domain profile. 73 379 IPR001932 -
Gma07g00208 421 SUPERFAMILY PP2C-like 53 381 IPR036457 -
Gma07g00208 421 CDD PP2Cc 73 379 IPR001932 -
Gma07g00208 421 PANTHER PROTEIN PHOSPHATASE 2C 48 392 IPR015655 GO:0004722|GO:0006470
Gma07g00208 421 MobiDBLite consensus disorder prediction 383 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00208 Gma-Chr7 1712250 1722296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00208 51 385 PP2C-type Phosphatase Gene Family AT2G25070 76.190 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00208 K17499 - gmx:100776787 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00208 07 1712250 1722296 Gma07g00208 07 1712250 1722296 ECH